Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01181 ATGGTGTGGTGGTTGGTTGAGTTGAAGGAGGAGGTTTTCGATACGACTCTTCACTTCTTTGTCGATTCATTCAAGACGATCCTTTTCGCTTTGTTTCTATGCCTTCTTGCTTTAGGTGCAATGGTCGGGACGGTGGTCGGAGCTTTCAAAGGCCATAGCACTAGCATCAGCACTATTGTCGGCGCCACCGTAGCACTTCAACTATTGGAATACACAACGAAAAGGAAAGCGTATCTGATTCCTTTCTTTCTTTCATCCATCTGTTATCTTCTATTTTGGTCGTCTTCGACTTTATTGCTGGTTATATTTACTCATACTATGGAAGGTACAGTTCTTAGAAGGGTTATTCCATCAGACAACAGTTGCCTCTTTAATGCTGTTGGTTATGTTATGGACCACGACAAAGACAAGGCTACCGAGCTAAGACAGGTCATAGCTGCAACAGTAGCTAGTGATCCAACAAGGTATTCTGAAGCGTTTCTTGGAAAGCCAAATGAGGAGTACTGTGCTTGGATTCTTGATTCAGAGAAGTGGGGAGGCGCCATTGAGCTTTCGATACTATCCGAATATTATGGACGTGAAATTGCAGCATACGACATCCAGACGACACGATGTGATTTGTATGGTCAGGAAAAGAAGTATTCAGAAAGGGTTCTGCTGATATATGACGGACTCCACTATGATGCTTTAGTTATGTCTCCATTTGAGGGAGCTCCAGAAGAATTTGATCAGACCATATTTTCTGAGAATAGAGACAGGAGCAGTGGGCCCATTGAGGAGCAAGCTCTCCATTTTGTAAAAGAGCAGCAAAGGAAACGGAGCTTCACCGACGCCGCCAACTTCACTCTGCGCTGTGGGGTTTGCCAAATTGGAGTCATCGGCCAAACGGAGGCTGTAGAACACGCAAAAGCAACGGGTCATGTCAACTTTCAGGAGTATAGATGA 945 44.66 MVWWLVELKEEVFDTTLHFFVDSFKTILFALFLCLLALGAMVGTVVGAFKGHSTSISTIVGATVALQLLEYTTKRKAYLIPFFLSSICYLLFWSSSTLLLVIFTHTMEGTVLRRVIPSDNSCLFNAVGYVMDHDKDKATELRQVIAATVASDPTRYSEAFLGKPNEEYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLHYDALVMSPFEGAPEEFDQTIFSENRDRSSGPIEEQALHFVKEQQRKRSFTDAANFTLRCGVCQIGVIGQTEAVEHAKATGHVNFQEYR 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9611098 9617981 + CmoCh01G011810.1 Cmo01g01181 374664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01181 314 Pfam OTU-like cysteine protease 118 212 IPR003323 -
Cmo01g01181 314 Gene3D - 101 279 - -
Cmo01g01181 314 ProSiteProfiles OTU domain profile. 111 233 IPR003323 -
Cmo01g01181 314 SUPERFAMILY Cysteine proteinases 113 231 IPR038765 -
Cmo01g01181 314 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 103 312 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
Cmo01g01181 314 PANTHER UBIQUITIN THIOESTERASE OTU1 103 312 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01181 Cmo09g00952 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01181 Cmo-Chr1:9611098 Cmo09g00952 Cmo-Chr9:5002570 1.06E-152 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01181 K13719 - csv:101222942 395.971