Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01194 ATGATCTGCGCGGTGAAACAATCTCCTAGGGCTATCATTTGCTCTGATGTTGTTATTCGGCCCAAAATCTCCGTTCCCTCTCAGCGATCCTCGTTTCTTCCTCCACTTCCGCTACAAAAACCTCGAAACTCCGCTGTTTCTGTTCATAAACCTGTACATGTTTCATCGCTTGAGAAATTTGGATCACTGGGGGTTCGTAAAGCTAATTTGATCAAATGCGAAGCTTACGAGGCTGAGCGATCGCAGCCGATCGATTCGAGCTTTGAGTTGCCGCAGACTCCGACCCCTTCAGAGGCCGCTAAGAAGTTGAAAATAGGATCATACTTCGCTCTATGGTGGGCTTTGAACGTGGTTTTCAATATCTATAACAAGAAGGTTTTGAACGCTTACCCGTTTCCATGGCTGACTTCGACTCTGTCCCTCGCCGCTGGATCTCTGATCATGTTGATCTCATGGATGACAAGAATTGCAGAGGCGCCTAAAACCGATTTGGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTATTGCCCATACAATTGGACATGTTGCAGCGACCGTGAGTATGTCAAAGGTTGCTGTTTCATTCACTCACATCATCAAGAGTGGTGAACCTGCTTTTAGTGTATTGGTTTCGAGGTTCTTGTTGGGCGAGACCTTCCCGCTTCCTGTCTACTTGTCGCTCCTCCCAATTATCGGTGGATGCGCTCTTGCTGCTGTGACTGAGCTCAACTTTAACATGACGGGTTTCATGGGTGCCATGATATCGAACTTGGCATTCGTATTCCGTAACATATTTTCGAAGAGGGGCATGAAGGGAAAATCCGTTAGCGGGATGAACTACTATGCATGTTTATCGATTTTATCTTTGCTAATCCTTACACCATTTGCATTTGCTGTGGAGGGGCCTCAGTTATGGGCTGCTGGATGGAAAACAGCCATATCTCAAATCGGACCTCATTTTGTTTGGTGGGTAGCAGCACAAAGTATATTCTACCATCTCTATAACCAAGTGTCTTACATGTCCTTGGACGAGATTTCTCCCTTGACGTTCAGCGTCGGAAACACCATGAAACGTATATCTGTCATCGTTTCTTCCATCATCATCTTCCACACGCCTGTGCAGCCAGTGAATGCTCTCGGAGCTGCCATTGCGATTCTCGGAACCTTTATATACTCGCAGGCAAAGCAATGA 1191 46.35 MICAVKQSPRAIICSDVVIRPKISVPSQRSSFLPPLPLQKPRNSAVSVHKPVHVSSLEKFGSLGVRKANLIKCEAYEAERSQPIDSSFELPQTPTPSEAAKKLKIGSYFALWWALNVVFNIYNKKVLNAYPFPWLTSTLSLAAGSLIMLISWMTRIAEAPKTDLEFWKSLFPVAIAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSILSLLILTPFAFAVEGPQLWAAGWKTAISQIGPHFVWWVAAQSIFYHLYNQVSYMSLDEISPLTFSVGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQAKQ 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9681913 9685164 - CmoCh01G011940.1 Cmo01g01194 374677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01194 396 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 103 395 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cmo01g01194 396 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC-LIKE 29 396 - -
Cmo01g01194 396 Pfam Triose-phosphate Transporter family 103 392 IPR004853 -
Cmo01g01194 396 PANTHER SOLUTE CARRIER FAMILY 35 29 396 - -
Cmo01g01194 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 239 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01194 Cmo16g00906 CCT
Cmo01g01194 Cmo16g00906 ECH
Cmo01g01194 Cmo09g00935 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01194 Cmo-Chr1:9681913 Cmo07g00292 Cmo-Chr7:1429581 0 dispersed
Cmo18g00130 Cmo-Chr18:937564 Cmo01g01194 Cmo-Chr1:9681913 1.46E-66 dispersed
Cmo01g01194 Cmo-Chr1:9681913 Cmo16g00906 Cmo-Chr16:5410802 0 wgd
Cmo01g01194 Cmo-Chr1:9681913 Cmo03g00550 Cmo-Chr3:5496170 3.08E-173 wgd
Cmo01g01194 Cmo-Chr1:9681913 Cmo09g00935 Cmo-Chr9:4905641 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01194 K15283 - csv:101220046 716.842