Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01214 ATGGATTCTCATCAACTGTTTGGATTTGGAGTCAATAGTGCAGGTGTTTCTTGTACTCCTTATTCCTCTATTCCATCTTTACCTAATACCTTGCTTGGACCCTTGAAATTTAGTGTTAGAAATTCCCCGGCCTCTTCTTCGTTTTTTTCGTCGTCGTATTTTGAATTGGATTCATTTCGGGCGACTACGGTGAGTGATAATCAAGATCAGAGGAACTCCCCTGAGAATCTCTCTGGACTTAGTCCTTCTTGTAATTCGTCGTTTGAAACAAATAGTTTTAATCAAATAGCGTCGTCGAATTTGGATCCGGTGTCGAATGCGTTTGTTTACGATGGATGCTCAAACGAGAATATAAGCTACACGTTGAAACAATTGGAGAGTGTTCTTATGGGGCCGGATAATGAGGAAGTTGTGAGTAAGCCTGATGCTTCGTTTGGAGATAGTAGCAGGCCACAGATTATGGGGCAGAGGTCCTACTCATGGAGCCAAGATCGACAGGGCGGGTTGAATCTTGTACAGTCTCAGACGTTGCCGGTGTCGGTAAGCCAGCGATCTCAAGCAGTTCACTTGGGGAAGCGTCAAAAATCGATGGATGAATCGATATTGCAGCAGGGAGGATTTTCATATGATAATTTGAAGGAGTTGCTGATTGAGTGTGCAAGAGCTTTAGCTGAAAATAGGATGGAGGATTTTGATAACTTGGTTGCCATAGCAAGAGGTGCTGTGTCTATCAGCGGAGAACCGATCCAGCGTCTCGGTGCTTACATGGTGGAAGGGTTGGTGGCAAGGAAAGAGGAGTCGGGGGCAAATATATACCGTGCTCTAAACTGTAGAGAGCCTGCAAGTGATGATTTGCTATCTTATATGCATATGCTATATGAAATCTGCCCTTACTTGAAGTTCGGTTACATGGCAGCTAACGGGGCGATTGCCGAAGCCTGCAGAAACGAAGACCGCATCCACATTATAGACTTCCAGATTACTCAGGGTACACAGTGGTTAACTCTTCTTCAGGCACTTGCAGCAAGGCCCGGTGGTGCTCCCCATGTGAGAATAACTGGTATCGACGACCCTGTTTCTAAGTATGCCCGTGGTGAGGGGTTGGAGGTCGTTGAGAGGCGGTTGGCTGAAGTCTCGAGGAAGTATGGAATACCAGTAGAGTTTCATGGATTACCCGTTTTCGCTCCAGACGTCACGCGTGGTATGCTTGATATCAGACCCGGGGAGGCTCTGGCTGTAAACTTCCCCTTGCAACTTCATCATACCCCAGACGAAAGCGTCGACGTAAACAATCCACGGGACGGTTTGCTGAGAATGGTGAAGTCATTGTCCCCAAGGGTAGTAACTTTGGTAGAGCAAGAATCCAACACCAACACAACCCCTTTCTTCAACAGGTTTGTGGAAACTATGGATTACTACTTAGCAATCTTCGAGTCCATTGATGTCACTCTACCAAGGAACAGCAAGAAGGGTATCAACATCGAGCAGCATTGTTTGGCGAAAGATATCGTTAACGTCATCGCTTGCGAGGGGAGGGAACGAGAAGAACGCCACGAGCTCTTCGGCAAGTGGAAAACAAGATTGACAATGGCAGGGTTCTGCCAGTTCCCTTTGAGCTCTTACGTCAACTCCGTCATCAGGAGCCTGCTCAGGTGCTATTCGAAGCATTACACTCTCGTCGAAAAAGATGGAGCAATGCTGTTGGGATGGAAAAACAGGAACCTGATATCTGCCTCGGCCTGGTATTGA 1749 46.88 MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDSFRATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASSNLDPVSNAFVYDGCSNENISYTLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQGGLNLVQSQTLPVSVSQRSQAVHLGKRQKSMDESILQQGGFSYDNLKELLIECARALAENRMEDFDNLVAIARGAVSISGEPIQRLGAYMVEGLVARKEESGANIYRALNCREPASDDLLSYMHMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQITQGTQWLTLLQALAARPGGAPHVRITGIDDPVSKYARGEGLEVVERRLAEVSRKYGIPVEFHGLPVFAPDVTRGMLDIRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRMVKSLSPRVVTLVEQESNTNTTPFFNRFVETMDYYLAIFESIDVTLPRNSKKGINIEQHCLAKDIVNVIACEGREREERHELFGKWKTRLTMAGFCQFPLSSYVNSVIRSLLRCYSKHYTLVEKDGAMLLGWKNRNLISASAWY 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9797559 9799307 + CmoCh01G012140.1 Cmo01g01214 374697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01214 582 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 19 581 IPR005202 -
Cmo01g01214 582 ProSiteProfiles GRAS family profile. 203 582 IPR005202 -
Cmo01g01214 582 MobiDBLite consensus disorder prediction 145 159 - -
Cmo01g01214 582 Pfam GRAS domain family 212 581 IPR005202 -
Cmo01g01214 582 MobiDBLite consensus disorder prediction 136 159 - -
Cmo01g01214 582 PANTHER CHITIN-INDUCIBLE GIBBERELLIN-RESPONSIVE PROTEIN 1 19 581 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01214 Cmo09g00910 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01214 Cmo-Chr1:9797559 Cmo20g00673 Cmo-Chr20:3276967 7.56E-175 dispersed
Cmo01g01214 Cmo-Chr1:9797559 Cmo09g00910 Cmo-Chr9:4762310 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
9095 PF03514 GRAS 7.80E-126 CL0063 Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01214 - - csv:101216606 971.844