Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo01g01236 | ATGATGTTATCGCCATCGCCTTCGACGATAGCTCGGAGTTCACTCGAGGAAATGCTCGATTCGCTTCGACGAAGGGATGAGATTGATAAGCCTAAAGATGCGCCCCCTGCATTGCCGTCTCGACCCACTTCGAAGGCTCGGACTCCCCCGGTGGGACGGGCTTTACCTGTCAATTTCAGGGTTAATGTTGATGGCTCCTCTGGCTGCTCTATTAATGGCTTCAATGGAAGGGAAGATGTAATGAGAAAGGAGAATCGTTTGGGTAACTTTGCATTCAAGAGATTGAATAGAGATCAAGATGAGGAATCGCCTTACATATTAGCTTCAGAAAATGAAAATGGAGATCGAATGAATGGTTCGAATCTTCGTGGGTCTTATTGGGAGGACAATATCGGTTATTTTCTTCAGAAGAAACTCCATGTTTGGTGTCAACTTCCAAATGGACAATGGGAGTTAGGAACCATACAGTCGAGCACTGGGGCGGAGGCATCTGTCATGCTTTCGAACAAAAAGGTTATTAAAATTTCGACCGTAGATCTTTTACCTGCCAACCCAGATATCATCGAGGGGGTTGATGATCTTGTACAGCTTGGTTTTCTGAACGAGCCTTCGGTTCTTCACAGTCTCCATCGAAGATTTTCTCAGGATAAGATTTATAGTAACGCAGGGTCGGTTTTGATAGCATTCAACCCCTTGAAAGACATTAAACAGTATGGAAAAGAATTTATTGAAGCCTACAGACAGAGAGTCATAAACAACCCTCATGTTTATGCTACAACAGATGCTGCTTATTCTGGGATGTTAAGAGATGAAGTTAATCAATCCATTATCATCAGCGGCGAAAGTGGAGCGGGAAAAACGGAGACAGCAAAAGCTGTGCTTGAATACTTGACTTCTCTCGGTGGTGTCAGTGGCATAGATGACAGAATTTCTCGAGCGAATGTTATACTCGAAGCATTCGGGAATGCAAAAACCTCCAGAAACAACAATGCCAGCAGATTTGGGAAGTTGATTGAAACTCTCTTTAGCAGAACAGGGAAGATATGTGGTGCTTCGAGAGTCGTTCGCCTGGTTAATGGCGAAAGATCATTCCACGTCTTCTATCAACTTTGTGCTGGACTACCATCTAGACTTAAAGAGAAATTTAATATCAGAGCGGCCAGTGAGTACAGTTACCTCAATCACAGTGAATGCCTGGTGATTGGTGGTGTCGATGATGCACGGAAATTTAACATTCTTGTGGAAGCCTTAGACACACTTCAATTCACAAAGGAAGATCAAGAGCATGCATTTGGTTTGCTTGCTGCAGTTTTGTGGATAGGGAACATTACGTTTCAAATAATTGATAGCGAAAATCATGTAGAGGTCATAGCTAATGAAGCGGTTGCAAATGCTGCCAAGTTGATGGGCTGCAGTTTTAATGAGCTGAAGTTAGTTTTATCAACCCACAAAGAGCAATCTGGCAAGGATAGCATTGCTAAAAAATCGACATTACAACAGGCTACTGATGCAAGAGATGCATTAGCAAAATTTATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAGATCAATAAGTCGCTTCAACCAGGAAGGGAGTATTCTGGAAGATCCATTAATGTCCTTGACATCTATGGGTTCGAGTCATTTAAGAAGAACGGCTTCGAACAATTTTGTATCAATTATGCAAATGAGAGACTGCAGCAGCATTTTATTCGGCATCTTTTCAAACTTCAGCAGGAGGACTACGAATTTAACGGGGTCGATGGTATGAAAGTCAACTTTGAAGACAATCAAGAGTGTTTGAATCTTATTGAGAAGAAGCCTCTAGGAGTTCTCGCCTTGATGGACGAAGAGTTAAGTTTTCCGAAGGCTACAGACCTGACATTTGCTAATAAACTTAAGCAGCACTTTAAATCTCATCCCCGCTTTAAAGGGGAAAGAGGTAGGGCTTTCGGGGTTCGACATTACGCCGGAGAGGTTGTATATGATACAAATGGGTTTTTGGAGAAGAATAGAGATCTCCTGCATTCAGATTCCATCCAACTCTTTTCATCATGTACTTCCAAGCTACTGAAACTATTTGCCTCCAAAATGGTTAACCATTCCTACAAACCAGCAGGTTCGATAAGCTCTACAAAGGGCGTAGAATCCCCTGAGCCAGGTGTTGGTACTAAGTACAAGGCTCTACTATTTGAGCTATTTCATAAATTGGAGCGCACGAGCCATCACTTCATTTGTTGCATGAGACCGAACCGAAGTCAAGTTTGTGGCTTATTTGAGGAGGACCTTGTCCTACAACAACTTAGGTACTGTGGCATTTTGGAGGTTATTAGGATTTCAAGGTCTGGATATCCTATCAGGATAACGCATAAAGAATTTGCTGGAAGGTATGAATTCTTCCTTGAAGAAGCGGGTGTAGCTCGAGATCCGTTGAGTATATCAATTGCTGTTCTGCAGCATTTTAATGTCCACCCCGAGATGTACCATGTTGGTTATACGAAACTATTATTCCGAACTGGGCAGATTCGGGCCGCCTTGGAGGAAAGGAGGACGCAGGCTATGCAAAGCATCCTCGGGGTTCAAAAACACTTCCGTGGTAGCCATTCTCGTGGCCACTTCCATGAACTTAAGCATGCCGCCACGATCTTACAATCATTTATTCGCGGCGAAAGTTCTAGAAGGAGAAGTACCGGTAAGGTGAAGAGGTTCTCATTCACTGTGTGCGCTTTCAATGTTCCTTCTAAGGTGTATGAACAGCAGGCAATCATACGATTACAATCCGTAATACGTGGTTCGTTGGTTCGAAATCATTTTATGGGCAAGAGTGATTCGAATAGGTTTGAAAATCGACCGAACAGGGGCAGGAGACTTTCAGAGGATCACGCGTTGCCTGCAACACTGACCGACCTTCAAAAGAGGGTCCTTGAAGCGGAAGCAACCATAGGGAAAAAGGAAGAGGAAAATGCTGCATTGCGGGACCAAGTAAAGCAATTTGAGGCTAGGCGGTTAGAATATGAAGCCAAGATGAAGTCCATGGAGGATACGTGGCAAAAGCAGATGGCATCTTTGCAAACGAGTCTTGCTGCTGCTAAAAAGAGTCTTGCTACTGAAAATATGGCCGGAAGGGTTGGTGCAGGTAACTCACCACCTCACTATTACGATTCTGAAGATACGACGTCCATGGAATCTCGAACTCCCCGTGAAGCTGGAGCAGGGCGAGAAATGAATGGTACATCATTTGCCATGAACAATCTCGTAAAGGAGTTCGAACAGCAAAAGAATGCATTCGATGATGATGCCAAAGGTTTGGCCGAAGCAAAATCAGGTCAGGGACAGCCAGGAGGGGCTAACACGAATACGGACGAAGAATACCGTAAAATTAAAGTCCGGTTCGAAGCATGGAAAAAGGAGTACAAGGAAAAACTACGTGAAAATAAACCTAAGGTTCATAAACATGGACCTTTCGAGGCTGATATAATTCGTCGAAAATGGTGGGGGAAGTTGCGGTTAAGATCGTCATAG | 3525 | 43.66 | MMLSPSPSTIARSSLEEMLDSLRRRDEIDKPKDAPPALPSRPTSKARTPPVGRALPVNFRVNVDGSSGCSINGFNGREDVMRKENRLGNFAFKRLNRDQDEESPYILASENENGDRMNGSNLRGSYWEDNIGYFLQKKLHVWCQLPNGQWELGTIQSSTGAEASVMLSNKKVIKISTVDLLPANPDIIEGVDDLVQLGFLNEPSVLHSLHRRFSQDKIYSNAGSVLIAFNPLKDIKQYGKEFIEAYRQRVINNPHVYATTDAAYSGMLRDEVNQSIIISGESGAGKTETAKAVLEYLTSLGGVSGIDDRISRANVILEAFGNAKTSRNNNASRFGKLIETLFSRTGKICGASRVVRLVNGERSFHVFYQLCAGLPSRLKEKFNIRAASEYSYLNHSECLVIGGVDDARKFNILVEALDTLQFTKEDQEHAFGLLAAVLWIGNITFQIIDSENHVEVIANEAVANAAKLMGCSFNELKLVLSTHKEQSGKDSIAKKSTLQQATDARDALAKFIYASLFDWLVEQINKSLQPGREYSGRSINVLDIYGFESFKKNGFEQFCINYANERLQQHFIRHLFKLQQEDYEFNGVDGMKVNFEDNQECLNLIEKKPLGVLALMDEELSFPKATDLTFANKLKQHFKSHPRFKGERGRAFGVRHYAGEVVYDTNGFLEKNRDLLHSDSIQLFSSCTSKLLKLFASKMVNHSYKPAGSISSTKGVESPEPGVGTKYKALLFELFHKLERTSHHFICCMRPNRSQVCGLFEEDLVLQQLRYCGILEVIRISRSGYPIRITHKEFAGRYEFFLEEAGVARDPLSISIAVLQHFNVHPEMYHVGYTKLLFRTGQIRAALEERRTQAMQSILGVQKHFRGSHSRGHFHELKHAATILQSFIRGESSRRRSTGKVKRFSFTVCAFNVPSKVYEQQAIIRLQSVIRGSLVRNHFMGKSDSNRFENRPNRGRRLSEDHALPATLTDLQKRVLEAEATIGKKEEENAALRDQVKQFEARRLEYEAKMKSMEDTWQKQMASLQTSLAAAKKSLATENMAGRVGAGNSPPHYYDSEDTTSMESRTPREAGAGREMNGTSFAMNNLVKEFEQQKNAFDDDAKGLAEAKSGQGQPGGANTNTDEEYRKIKVRFEAWKKEYKEKLRENKPKVHKHGPFEADIIRRKWWGKLRLRSS | 1174 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 9898036 | 9907422 | - | CmoCh01G012360.1 | Cmo01g01236 | 374719 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo01g01236 | 1174 | CDD | MYSc_Myo8 | 203 | 839 | IPR036022 | - | |
Cmo01g01236 | 1174 | Gene3D | - | 785 | 853 | - | - | |
Cmo01g01236 | 1174 | PANTHER | MYOSIN | 122 | 1171 | - | - | |
Cmo01g01236 | 1174 | PRINTS | Myosin heavy chain signature | 219 | 238 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo01g01236 | 1174 | PRINTS | Myosin heavy chain signature | 315 | 342 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo01g01236 | 1174 | PRINTS | Myosin heavy chain signature | 273 | 298 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo01g01236 | 1174 | PRINTS | Myosin heavy chain signature | 591 | 619 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo01g01236 | 1174 | PRINTS | Myosin heavy chain signature | 538 | 566 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo01g01236 | 1174 | ProSiteProfiles | IQ motif profile. | 877 | 905 | IPR000048 | GO:0005515 | |
Cmo01g01236 | 1174 | MobiDBLite | consensus disorder prediction | 17 | 34 | - | - | |
Cmo01g01236 | 1174 | MobiDBLite | consensus disorder prediction | 1105 | 1124 | - | - | |
Cmo01g01236 | 1174 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 419 | 527 | - | - | |
Cmo01g01236 | 1174 | Gene3D | Kinesin motor domain | 188 | 784 | IPR036961 | - | |
Cmo01g01236 | 1174 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 165 | 896 | IPR027417 | - | |
Cmo01g01236 | 1174 | SMART | iq_5 | 918 | 940 | IPR000048 | GO:0005515 | |
Cmo01g01236 | 1174 | SMART | iq_5 | 853 | 875 | IPR000048 | GO:0005515 | |
Cmo01g01236 | 1174 | SMART | iq_5 | 876 | 898 | IPR000048 | GO:0005515 | |
Cmo01g01236 | 1174 | Gene3D | - | 550 | 741 | - | - | |
Cmo01g01236 | 1174 | Gene3D | - | 362 | 418 | - | - | |
Cmo01g01236 | 1174 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Cmo01g01236 | 1174 | Pfam | IQ calmodulin-binding motif | 921 | 939 | IPR000048 | GO:0005515 | |
Cmo01g01236 | 1174 | Pfam | IQ calmodulin-binding motif | 879 | 896 | IPR000048 | GO:0005515 | |
Cmo01g01236 | 1174 | ProSiteProfiles | Myosin motor domain profile. | 189 | 852 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo01g01236 | 1174 | MobiDBLite | consensus disorder prediction | 1041 | 1076 | - | - | |
Cmo01g01236 | 1174 | ProSiteProfiles | IQ motif profile. | 919 | 947 | IPR000048 | GO:0005515 | |
Cmo01g01236 | 1174 | PANTHER | MYOSIN-2 ISOFORM X1 | 122 | 1171 | - | - | |
Cmo01g01236 | 1174 | Coils | Coil | 968 | 1016 | - | - | |
Cmo01g01236 | 1174 | SMART | MYSc_2a | 183 | 853 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo01g01236 | 1174 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
Cmo01g01236 | 1174 | Pfam | Myosin head (motor domain) | 191 | 839 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo01g01236 | 1174 | Gene3D | - | 854 | 903 | - | - | |
Cmo01g01236 | 1174 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 136 | 185 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g01236 | Cmo-Chr1:9898036 | Cmo04g01333 | Cmo-Chr4:6791952 | 0 | dispersed | |
Cmo01g01236 | Cmo-Chr1:9898036 | Cmo09g00885 | Cmo-Chr9:4595995 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo01g01236 | K10357 | - | csv:101210624 | 1807.34 |