Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01324 ATGGCGTCACAATACTCAAGAGGAACTCACCGCCTTCACCTTCCTGAGAAAAGGGTAAGGCTCAGAAGTGAGCGTATGCCTGGGAATAAGTATAAAGTTAACTCAAACGATATTACGGACCATATACCAGGTCGACTAGAAAGGCTCTTGCGAGAGAGAAAGCTAAGGAAAAGCAGTAAGGATTCATATTCAAATGAGGTGAACGACCACAGTAAGGAGTCTGAACTAATTGAAAATGACCTTCGTTCGAAAGAAGAAGAAAACGCTGGAATTTCCTATAAATTTTCGGAAGCTTCTGCAGCCTCAAGGGCCTTTGCCGAAGGATGTGACAAGCAAGAGGGCAAGCCTCCCAGACAACGGTTGCTGGTTGTGGCCAATAGGCTGCCAGTTTCTGCGGTTAGGAGAGGTGAAGATTCCTGGTCTCTAGAGATTAGTGCTGGAGGTCTAGTGAGTGCACTTCTGGGCGTGAATGACTTTGAAGCGAGATGGATTGGTTGGGCTGGTGTAAATGTGCCAGATGAGGTAGGACAAAAGGCACTGACTGAAGCTTTGGCTGAGAAGAGGTGTATCCCTGTTTTCCTTGATGAAGAAATTGTTCATCAATACTACAATGGTTATTGCAACAACATTTTATGGCCTTTGTTTCATTACCTTGGCCTTCCTCAAGAAGATCGTCTTGCCACCACCCGTAGCTTTCAGTCTCAGTTTGCCGCATACAAGAAAGCAAACCAAATGTTCGCTGACGTAGTTAACAAGCACTATGAGGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTTCTTCCCAAATGTCTAAAAGATCATAATCGTAAGATGAAAGTCGGCTGGTTTCTCCATACACCTTTTCCTTCTTCTGAAATCCACAGGACCCTTCCGTCCCGATCAGAGCTTCTGCGTTCAGTACTTGCTGCCGATCTGGTTGGCTTTCACACGTATGATTATGCTCGTCATTTCGTAAGTGCTTGTACTCGTATTCTTGGACTTGAGGGTACACCAGAAGGAGTTGAGGATCAAGGAAAGCTAACGCGAGTTGCTGCATTCCCTATTGGTATCGACTCAGATCGATTCATACGTGCACTCAAGACTGCTGAAGTCCAAGTACGCATTGAAGAGTTGAAGGATAGATTTAAAGGTCGAAAGGTAATGTTAGGCGTTGATCGTCTTGATATGATTAAAGGAATACCTCAAAAGATATTAGCATTTGAAAAATTCTTGGAGGAAAACACTGATTGGCGTGATAAAGTTGTTTTGCTGCAAATTGCAGTGCCAACAAGAACAGATGTGCCAGAATATCAAAAGCTTACAAGCCAAGTTCATGAAATAGTTGGACGCATTAATGGGAGGTTTGGAACATTGACTACCGTGCCCATACATCATCTGGATCGCTCCCTTGATTTTCCTGCATTATGTGCGCTCTATGCTGTAACTGATGTAGCGCTTGTCACATCTTTGAGGGATGGAATGAATCTCGTCAGTTATGAATTCGTCGCTTGCCAGGATGCAAAGAAAGGGGTTTTAATTCTTAGTGAGATTTCTTTCGATATGTGCGTAATGAATTGA 1587 43.67 MASQYSRGTHRLHLPEKRVRLRSERMPGNKYKVNSNDITDHIPGRLERLLRERKLRKSSKDSYSNEVNDHSKESELIENDLRSKEEENAGISYKFSEASAASRAFAEGCDKQEGKPPRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVNDFEARWIGWAGVNVPDEVGQKALTEALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKDHNRKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFIRALKTAEVQVRIEELKDRFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENTDWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTTVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDAKKGVLILSEISFDMCVMN 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10528280 10538062 + CmoCh01G013240.1 Cmo01g01324 374807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01324 528 Coils Coil 67 87 - -
Cmo01g01324 528 CDD GT20_TPS 120 519 IPR001830 GO:0003824|GO:0005992
Cmo01g01324 528 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 119 525 - -
Cmo01g01324 528 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 57 520 IPR001830 GO:0003824|GO:0005992
Cmo01g01324 528 Gene3D Glycogen Phosphorylase B; 362 524 - -
Cmo01g01324 528 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 57 520 - -
Cmo01g01324 528 Gene3D Glycogen Phosphorylase B; 109 361 - -
Cmo01g01324 528 Pfam Glycosyltransferase family 20 120 520 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01324 Cmo-Chr1:10528280 Cmo19g01042 Cmo-Chr19:9093586 4.26E-94 dispersed
Cmo01g01324 Cmo-Chr1:10528280 Cmo18g00419 Cmo-Chr18:2755285 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01324 K16055 - csv:101204478 914.835