Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01333 ATGAGCATGACGATGGGCGGTGCGATTACAATAATTATTGTGGCAGGTTCTCTTCTGGTATGGGGATGGAGCTTCCTCAACTGGATTTGGCTGAAACCGAAGAAGCTCGAGAAGCAGTTAAGGGAGCAGGGCCTTGCCGGGAATCCCTATCGCCTTCTCTTTGGCGATTCCAAGGACATGGCGACCGCGATTCGCGAAGCCAGATCGCAGTCCATGAACTTCTCTCATCATATCGCTCATCGCGCCCTCCCTTCCTCGCACCTCACCATCAATAAATACGGTAAGAATTGTTTCGCGTGGGTTGGACCAACTCCAAGAGTGTATATAACACACCCCGAACAACTTAAGACTGTCTTTTCTCTTATCAATGACATTCCTAAAGCCCCTTTATTTCCTCCTGCAAGAACCCCCGGAAGTGGCGGACTTGTCTCTCTCGAGGGATCTAAATGGGCTAAACATAGAAAGATCATCAATCCCGCCTTTCATACCGAGAAGTTAAAGGACATGTTTCCAGCGTTCTTTGAGAGTTGTAATGAGATGATTAAGAAATGGGAAGTGATGGTCTCTGAGGAAGAAGAAGGGCGTTTCGAGTTAGATGTTTGGCCTGATTTGCAGAATATGACTGCAGATTCGATATCTCGAACAGCATTTGGGAGTAGCTATGAGGAAGGAAAGAAGATCTTCCAGTTCTTGAAAACCTGGGTTTCTTTATTGGTAGCACGCCTAACAAAGGGAGTCTACAACATTCCTGGGTGGAGGTTTGTACCAACCCAGATGAACAGAAAGATGGAGGAGGTTAATAGAGAAATAAAAAGTATGGTTTGGGGGATTATAAGCAAGAGACAGACGGCTATGGAGGCTGCTCAAGTTTCTAATAATGCTGATCTTCTTGGGATACTTTTGGAAGAAAATAAGAAAGATGCTGTTGGAATGTCTATGGAGGATATCATTAGTGAGTGCAAGCTTTTTTATTTTGCTGGCCAAGAAACAACGGCCTCATTGCTTGTTTGGACGATGGTTCTACTTGGTCGGTATTCGGAATGGCAAGATCAAGCAAGAGCGGAAGTGCTTGATGTTTTTGGTGAAGACAAGAAAGTGGATTTCGATGGTTTAAATCGTCTCAAAGTAGTGAGTATGATACTATATGAAGTTCTCAGGCTATATCCTCCCGTTGGAATCTTAGCTCGAGGAATACACAAGGAAACAAAGCTTGGAAACTTGTTATTGCCGGGTGGGGTGTCAATAGGCATACCAATCATTCATATTCACCACGATCACCAAATATGGGGTGAAGATGCAGATGAGTTCAAGCCAGAGAGATTTTCAGAAGGAATTTCCAAAGCAACAAACAATAAAGTTTGCTTCCTACCGTTTGGATGGGGTCCTCGAATTTGTGTTGGTCAAAACTTCGCCATGATTGAAGCAAAAATAGCATTAACAATGATTTTGCAGCACTTCTCCTTCCAACTTTCCCCATCTTATACTCACGCTCCTGCTTCAAATGTCACTGTTCAACCACAACATGGAGCTCATCTCATCCTCCGTAAGCTCTAA 1554 44.02 MSMTMGGAITIIIVAGSLLVWGWSFLNWIWLKPKKLEKQLREQGLAGNPYRLLFGDSKDMATAIREARSQSMNFSHHIAHRALPSSHLTINKYGKNCFAWVGPTPRVYITHPEQLKTVFSLINDIPKAPLFPPARTPGSGGLVSLEGSKWAKHRKIINPAFHTEKLKDMFPAFFESCNEMIKKWEVMVSEEEEGRFELDVWPDLQNMTADSISRTAFGSSYEEGKKIFQFLKTWVSLLVARLTKGVYNIPGWRFVPTQMNRKMEEVNREIKSMVWGIISKRQTAMEAAQVSNNADLLGILLEENKKDAVGMSMEDIISECKLFYFAGQETTASLLVWTMVLLGRYSEWQDQARAEVLDVFGEDKKVDFDGLNRLKVVSMILYEVLRLYPPVGILARGIHKETKLGNLLLPGGVSIGIPIIHIHHDHQIWGEDADEFKPERFSEGISKATNNKVCFLPFGWGPRICVGQNFAMIEAKIALTMILQHFSFQLSPSYTHAPASNVTVQPQHGAHLILRKL 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10578058 10580692 - CmoCh01G013330.1 Cmo01g01333 374816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01333 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 16 513 - -
Cmo01g01333 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Cmo01g01333 517 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01333 517 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01333 517 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01333 517 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01333 517 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01333 517 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01333 517 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01333 517 Pfam Cytochrome P450 91 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01333 517 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01333 517 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01333 517 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01333 517 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01333 517 PANTHER CYTOCHROME 16 513 - -
Cmo01g01333 517 Gene3D Cytochrome P450 67 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01333 517 SUPERFAMILY Cytochrome P450 85 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01333 Cmo-Chr1:10578058 Cmo09g00674 Cmo-Chr9:3349383 0 dispersed
Cmo10g00784 Cmo-Chr10:3635735 Cmo01g01333 Cmo-Chr1:10578058 9.88E-167 transposed
Cmo11g01041 Cmo-Chr11:5744782 Cmo01g01333 Cmo-Chr1:10578058 0 transposed
Cmo01g01333 Cmo-Chr1:10578058 Cmo09g00672 Cmo-Chr9:3343664 1.59E-58 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01333 - - cmos:111432119 741.495