Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01349 ATGGCAATGGCGACCTTCAAGCTTCATCCTCTTCTTCTCGTTTTTCTTGTTCTGTTTCTTCTGCTTATTCCTTCACTGATTGCGGCACAGGAAGAGTGTAACTGTCCTGAAGAAGAAGACGAAGGAATCCGAAACAAACCGCTAGCCCTAAAATACAAAATCGTCGCCATAGCTACGATTCTTGCCGCTGGATTAATCGGAGTTTCTATTCCGATGCTCGGTAAGGTGATTCCTGCTTTGAGTCCTGAGAAGGAGATTTTCTTTGTTATTAAAGCCTTTGCCGCTGGTGTCATTTTGGCTACTGGATTCATCCATGTTCTTCCTGATGCTTACGAGAGTTTGCAATCGCCGAAACTGAAAGAGGATCCCTGGGCGAAGTTTCCGTTCACTGGCTTGGTGGCTATGGTGGCGGCTATTGGTACTTTAATGGTGGATGCCGGTGCTAGCTCTTATTATACTCGTCTTCATCTGAAGAAGGCTCAGCCTGAGATTGATGAAATGAACGGCAGAGCTATCGAAGCTCATATTCCTGTTCATACTCACGGCGGGCATGGCCACGCTCATGACTCCTCTGATGTCACTGGAACACCGGCGGAGATTCTCCGGCACCGCGTGATCTCTCAGGTACTGGAGCTGGGGATAGTGGTACATTCGGTAATTATTGGGATCGGTTTGGGCGTTTCTGAAACTCCCAAAACCATTAGGCCTCTAGTGGCGGCCATTACTTTTCATCAGTTATTCGAGGGCATGGGCTTGGGAGGATCCATAGCTCAGGCAAAGTTCAAGAACAGCGCAACAATAATAATGGCGCTATTCTTCTGTCTGACAACGCCAATTGGGATAGTAATAGGCATTGGAGTAACAAACGGTTACGACGAAGAGGACCCAAAAGCACTGATAGTAGAAGGGATATTGAACGCAGCTTCAGCAGGTATCTTAATCTATATGGCTCTTGTTGATCTGTTGGCTGCCGATTTTATGAACCCAAGAATGCAGAGTAATGGAAAACTTCAATTTATGGCCAATCTTTCTCTTATTCTTGGAGCTGCCTTGATGTCTTTACTCGCTATCTGGGCTTGA 1080 46.39 MAMATFKLHPLLLVFLVLFLLLIPSLIAAQEECNCPEEEDEGIRNKPLALKYKIVAIATILAAGLIGVSIPMLGKVIPALSPEKEIFFVIKAFAAGVILATGFIHVLPDAYESLQSPKLKEDPWAKFPFTGLVAMVAAIGTLMVDAGASSYYTRLHLKKAQPEIDEMNGRAIEAHIPVHTHGGHGHAHDSSDVTGTPAEILRHRVISQVLELGIVVHSVIIGIGLGVSETPKTIRPLVAAITFHQLFEGMGLGGSIAQAKFKNSATIIMALFFCLTTPIGIVIGIGVTNGYDEEDPKALIVEGILNAASAGILIYMALVDLLAADFMNPRMQSNGKLQFMANLSLILGAALMSLLAIWA 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10678998 10682738 - CmoCh01G013490.1 Cmo01g01349 374832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01349 359 PANTHER ZINC/IRON TRANSPORTER 22 359 - -
Cmo01g01349 359 PANTHER ZINC TRANSPORTER 1 22 359 - -
Cmo01g01349 359 Pfam ZIP Zinc transporter 51 356 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cmo01g01349 359 TIGRFAM zip: ZIP zinc/iron transport family 35 359 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01349 Cmo-Chr1:10678998 Cmo09g00698 Cmo-Chr9:3446176 0 dispersed
Cmo01g01349 Cmo-Chr1:10678998 Cmo09g00695 Cmo-Chr9:3433722 2.22E-75 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01349 K14709 - csv:101215851 502.286