Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01433 ATGGCGGAGGAGAGAGCGGTTTTCGATTGCGAAGCGGCGGAGAGAGTGGTGGCGGAGGTGAGGGAGAGCTATAATTCCGGGAAAACGAGAAGGTACGAATGGAGAGTGGAGCAAGTGAAGAATCTGTTGAAATTGGTGGATGAAAACCAGAGAGAGATGATCGATACGGTTCATTCCGACTTTTCCAAACCCGAATTCGAAGCCTTCGCTCATGAGATAGCTTTGTTGAAAAATTCATGTAAATTGGCACTTAAAGAACTCAGGCGTTGGATGACGCCAGAAAAGGTTAAAACTTCAATTACCACATTTCCTTCGTCTGCTGCAATTGTACCAGAACCTCTGGGTGTTGTCCTGATCATTTCTGCTTGGAATTATCCATTCTTATTATCTCTTGATCCAGTTGTTGGAGCAATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTTCCCCAGCAACATCATCTTTAATGGCAAAACTTGTAGGGAAATATTTGGATACTTCTGCTGTAAAAGTTATTGAGGGTGCTACTTCCGAAACTTCTGCTTTGCTGGAGCAAAAATGGGACAAAATATTTTACACAGGCAGTGGAAGAGTGGGGCGTATAGTTATGGCAGCTGCTGCCAAGCACCTTACACCAGTCGTTTTGGAGCTTGGAGGAAAATCTCCAGTAGTAGTTGATTCACAAATCAATTTACAAGTCGCGTGTAGGCGGATTATTGCTGGTAAGTGGGGTTGCAACAATGGGCAAGCATGCATTGCTCCTGATTATATCATAACTACGAAAGGATTTGCTCCAAAATTGGTGGAGACTCTGAAACAAGAACTGGAGAGATTTTATGGAAAGAACCCTATGGAAACTAAAGATTTGTCTCGCATTGTGAATGCTAACCACTTTGCTCGCTTGTCAAAGCTCTTAGATGATGATAAGGTTTCTGGCAAGATTGTGCATGGAGGTGAAAGGGACAAAGCCAAATTACAGATTACTCCGACCCTCTTATTGGATGTCCCTCGAGACTCTCTGATTATGACGGAGGAGATCTTCGGTCCCTTGCTTCCTATTCTCACGGTCGACAAAGTGGAGGATAGCTTCGAAGTAGTGAACTCGGGCACAAAGCCACTTGCAGCATATTTATTTACCAACAACAAGAGGCTCAAGGACCAGTTCGTAGCTTGCATCTCTGCAGGGGGTGTGGCCATCAATGACACCACCTTACATCTGACAGTTAGCACACTACCATTTGGAGGAGTTGGGGACAGTGGAATGGGATCTTACCATGGGAAGTTCTCATTTGATGCATTTAGCCATAAGAAGGCTGTTCTTTATCGAAGCTTCACAGGCGATGCGCCGATGAGATACCCGCCGTACACGAAGGGAAAGCTAAGAATTCTCAAGGCTCTTCTTGGAGGTGACATATGGGGTCTCATTCGTGCTCTTTTTGGGTGGTCATAG 1458 44.92 MAEERAVFDCEAAERVVAEVRESYNSGKTRRYEWRVEQVKNLLKLVDENQREMIDTVHSDFSKPEFEAFAHEIALLKNSCKLALKELRRWMTPEKVKTSITTFPSSAAIVPEPLGVVLIISAWNYPFLLSLDPVVGAIAAGNAVVLKPSEISPATSSLMAKLVGKYLDTSAVKVIEGATSETSALLEQKWDKIFYTGSGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSQINLQVACRRIIAGKWGCNNGQACIAPDYIITTKGFAPKLVETLKQELERFYGKNPMETKDLSRIVNANHFARLSKLLDDDKVSGKIVHGGERDKAKLQITPTLLLDVPRDSLIMTEEIFGPLLPILTVDKVEDSFEVVNSGTKPLAAYLFTNNKRLKDQFVACISAGGVAINDTTLHLTVSTLPFGGVGDSGMGSYHGKFSFDAFSHKKAVLYRSFTGDAPMRYPPYTKGKLRILKALLGGDIWGLIRALFGWS 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11208760 11215364 - CmoCh01G014330.1 Cmo01g01433 374916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01433 485 Pfam Aldehyde dehydrogenase family 11 442 IPR015590 GO:0016491
Cmo01g01433 485 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 218 225 IPR029510 GO:0016491
Cmo01g01433 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 222 422 IPR016163 GO:0016620
Cmo01g01433 485 PANTHER ALDEHYDE DEHYDROGENASE 3 485 IPR012394 GO:0006081
Cmo01g01433 485 CDD ALDH_F3FHI 13 444 - -
Cmo01g01433 485 PIRSF ALDH 2 479 IPR012394 GO:0006081
Cmo01g01433 485 PANTHER ALDEHYDE DEHYDROGENASE 3 485 - -
Cmo01g01433 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 21 440 IPR016162 GO:0016491
Cmo01g01433 485 SUPERFAMILY ALDH-like 14 458 IPR016161 GO:0016491
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01433 Cmo09g00776 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01433 Cmo-Chr1:11208760 Cmo09g00776 Cmo-Chr9:3947115 0 dispersed
Cmo02g01283 Cmo-Chr2:7648030 Cmo01g01433 Cmo-Chr1:11208760 1.00E-157 transposed
Cmo16g00705 Cmo-Chr16:3511971 Cmo01g01433 Cmo-Chr1:11208760 1.89E-163 transposed
Cmo01g01433 Cmo-Chr1:11208760 Cmo09g00775 Cmo-Chr9:3940010 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01433 K00128 - csv:101219329 836.639