Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo01g01443 | ATGGTACCTCAAATTTGTGCAATGCTTCATAAAATTAAGCATTATTTGGCTATGATTTCCTTGCAATTCGGGTATGCCGGGATGTACGTCATCACCATGCTCTGCCTTAAAAAGGGCATGAACCATTACGTTCTCGCCGTGTATCGACACCTTGTTGCCACCATCGTCATTTCCCCCTTCGCTTTCGTTCTCGAGAGGCCTGTGTTGGATCAAAATCTTTACTACGTGGGGTTAAAACTTACCTCAGCAACATTCACTTCTGCTACGGTTAATATTCTCCCCGCTGTAACCTTCATTATGGCTCTCGTTTTCAGGCTGGAAACAGTGAATTTCAAGAAAATTCGCAGCATCGCAAAGGTGGCCGGAACAATGGTGACGATCGGCGGAGCCATGGTGATGACTCTATACAAAGGACCGGTGGTCGAGATCTTCCACGCCCATGGCCACCACGCCGCCCAACAAACCAGCAGCGAGTCCGCCGACCAACACTGGGTCCTCGGCACCCTCATGCTCCTCGGCAGCATCGTCGGCTGGTCCGGCTTCTTCATCTTGCAATCGTTCACCTTGAAGAAGTACCCGGCCGAGCTGTCGCTTACCGCCTTGATATGCATCTCCGGCACGGTGGAGGGCTCCATTGTCACGCTCATTATGGAGCGTGATTTTAGCGTGTGGGTCATCGGCTGGGACTCCCGTCTTCTTGCCGCAGTTTATACGGTAAGCACAAGTAAGCCAGCAAATTCACCTTGGAAGCATAATCGGAGCCTTTTTCATAGTGATGGGGCTTTACTTAGTGGTGTGGGGCAAAGCCAAGGACCATCTCAACAAATTAACCAGTCAAAAGGGCGGCGCCGCCACGGAGTTGCCACTCACCGCCGAGCCGGAAACCGCCGAGGCCGCCACCAACGAGCGTTTCTCTTCCAAAGCTCCACCGGCGTGATGGTTGATCTTGTTGTATCTCAAGATTACGTAGCGTTACCGAGTATGCTTCAGCTCACTCTCAGAGATTCTCAAGTTCTCTCAAAACCCTAG | 1029 | 51.51 | MVPQICAMLHKIKHYLAMISLQFGYAGMYVITMLCLKKGMNHYVLAVYRHLVATIVISPFAFVLERPVLDQNLYYVGLKLTSATFTSATVNILPAVTFIMALVFRLETVNFKKIRSIAKVAGTMVTIGGAMVMTLYKGPVVEIFHAHGHHAAQQTSSESADQHWVLGTLMLLGSIVGWSGFFILQSFTLKKYPAELSLTALICISGTVEGSIVTLIMERDFSVWVIGWDSRLLAAVYTVSTSKPANSPWKHNRSLFHSDGALLSGVGQSQGPSQQINQSKGRRRHGVATHRRAGNRRGRHQRAFLFQSSTGVMVDLVVSQDYVALPSMLQLTLRDSQVLSKP | 342 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 11262018 | 11266050 | + | CmoCh01G014430.1 | Cmo01g01443 | 374926 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo01g01443 | 342 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 48 | 136 | - | - | |
Cmo01g01443 | 342 | MobiDBLite | consensus disorder prediction | 266 | 300 | - | - | |
Cmo01g01443 | 342 | PANTHER | WAT1-RELATED PROTEIN | 67 | 238 | - | - | |
Cmo01g01443 | 342 | MobiDBLite | consensus disorder prediction | 283 | 299 | - | - | |
Cmo01g01443 | 342 | MobiDBLite | consensus disorder prediction | 266 | 282 | - | - | |
Cmo01g01443 | 342 | PANTHER | WAT1-RELATED PROTEIN | 67 | 238 | IPR030184 | GO:0016021|GO:0022857 | |
Cmo01g01443 | 342 | PANTHER | WAT1-RELATED PROTEIN | 9 | 66 | IPR030184 | GO:0016021|GO:0022857 | |
Cmo01g01443 | 342 | PANTHER | WAT1-RELATED PROTEIN | 9 | 66 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g01443 | Cmo-Chr1:11262018 | Cmo04g02464 | Cmo-Chr4:18217217 | 5.40E-80 | dispersed | |
Cmo10g00283 | Cmo-Chr10:1264072 | Cmo01g01443 | Cmo-Chr1:11262018 | 1.62E-99 | transposed | |
Cmo01g01443 | Cmo-Chr1:11262018 | Cmo09g00792 | Cmo-Chr9:4054770 | 3.84E-147 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo01g01443 | - | - | csv:101216002 | 407.912 |