Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01529 ATGCCGCACAGAACGACTTATTTCTTCCCCAGGCAATTTCCGGATCGCGGATTTGACTCAGCGTCAACTTCCAAACAGATTTTGGATCACGAGAAGAAAATCAACAAGGACACTTTAAGTACCGAAAGTGACGCGAAACCGACCCCGCGGCCTGCTCGCGACTTTAGTGTCACGAAGAGTTCGGCTGTATCGGATCTTTTCACGGGGGACAAGTCTCAAAGCAAGAAGAAACTGCCTGCTCTTTACGATTGGTTGGTGAACAAGAAAGCAACACGATCAGCAACCGCTCACGTGAAAACTTGGCTTTCCAATTGCGATGAGGACCGCGAGCTTTTGCTTCCTCCACCTACCTCGGAACCAGATCATGATACAAAGAATGTTGAGGATCGGAGTGTTGACCGGCGCTTTGACCGGGAAGTTTCACTGCCTAGATTATCAAGCGGGAGTAGCTATGCAGGGAGTTTGTTTTCAGGCACGGGAACGGGGACTGTGGATGGCAACTTTTCCAGCGATGTTAAGGATTCATCGGTGTCGAAGATATTGTCCACGCGCACGGCGAGGCCGGAAGAGATTGTGGATGGAGATGGTGAGGAAAGCCTAGCGCAAAGAACGAAAGAGAGTTATTACCTGCAACTTGCTTTGGCTGCAACGCTTCGTTCTCATGCTAGTCTCGCTGGCGATCCCGTGCTTATGGAGGAAGGCAGGGTGGAAATTACGGACGCTGAAACTGTTTCTTATCGACTATGGGTAAGTGGTTGCCTGTCTTACTCCGACAAAATTTCCGATGGTTTCTACAATATTTTGGGTATGAACCCGTATCTTTGGGTTATGTGCAATGATTTTGAGGAAGGTAGACGGCTACCACCTCTGATGTCACTTAAAACCATTGAACCGAGTGAGACGTCAATGGAGGTGGTTCTTGTGGATAGACGTGGGGACTCTCGACTGAAGGAGCTTGAAGAGAAAGCACAAGAACTATATTGTGCTTCAGAGAACACCGTAGTGTTGGTGGAAAAACTAGGAAAACTTGTTGCGATCTACATGGGGGGCACTTTCCCGGTGGAGCAAGGGGGTTTGCACCTCCATTGGAAAGTGGTGAGCAAAAGATTGAGGGAATTTCAGCAATGCATTGTGCTACCAATCGGTAGTCTATCTATGGGATTATGCAGGCACCGTGCAATACTTTTTAAGAAATTGGCAGATTATATAGGTTTGCCGTGTCGGATAGCTAAAGGTTGTATGTACTGTGTTGCTGATCATCGATCCTCTTGCCTTGTCAAAATTGAAGATGACAAGAAATCGTTGAGGGAGTACGTTGTTGATTTAGTGGGGGAACCAGGAAATATACATGGTCCAGATTCCTCAATTAATGGAGGGCTCCAATCTTCAATGCCTTCACCACTTCACATTTCTCATTTAAAAGAGTTCCAAGAACCTTACGTGGAAAGTTGTTTAAGCCGTCAAATTGTTGGGTCAAAGCAAACCTGTGGTTCTCCGGATAATCCTCTACATTCAGGCCTTGGAGAGCGCCGGATGAGAGGGGGAAGCTCGTTATATAAAAATTCAGGGACTGGAACTGATAAATTGGTTGATCAAGCTGTTGGTGTGAGATCATCTCAGCTGTGTTTGGAAACTAAAGTGAGCGAGGAGTGTGCACTTCAGAGTCATATATTGGCACCCACTGACGCTGATGCCTCTAAGAACTTGGGTTCTGTTGCTGGTGCATCTTTACATGAAAACGCAGTTGTCATTGAAGAAATATACAGAAAAGAGGAAGTTGTGGTGGGAATTTCACTCGATGAATCTAGCATTGATCCGTCCAACTTAAGCTTGTCAACTCAAATTGATTCAAAAGAGGTTGAGAGTAGGTCTCGAAATTGTTCAGCATCAACACATCCAAAATATCTGATACTTGAACCATCTCTTGCAATGGATTGGCTGGAAATTTCATGGGATGAATTACATATAAAGGAGCGTGTTGGAGCTGGCTCATTTGGAACAGTGCACCGTGCTGAATGGCATGGATCGGACGTTGCTGTCAAGGTTTTAAGCGTGCAGGATTTCCAAGACGATCAGTTGAAGGAGTTTCTAAGAGAGGTTGCAATAATGAAGCGGGTCCGCCATCCGAACGTGGTACTCTTCATGGGTGCAGTTACTAAGAGACCTCATCTTTCAATAGTGACTGAATATCTGCCTAGGGGTAGTCTATACCGCCTAATTCACAGGCCATCCTCTGGTGAACTGATGGATCAAAGGAAACGATTGCGAATGGCGTTGGATGTGGCAAAGGGAATCAACTACCTACATTGTCTCAATCCTCCCATAGTACACTGGGATCTTAAATCCCCCAATTTGTTGGTTGACAAAAATTGGACGGTCAAGGTTTGCGACTTTGGGTTGTCCAGATTCAAAGCCAACACTTTCATATCATCGAAATCTGTAGCTGGAACTCCTGAGTGGATGGCTCCAGAATTCCTTCGTGGAGAGCCTTCAAATGAGAAGACTGATGTCTACAGTTTTGGAGTGATCCTCTGGGAACTAGTCACCATGCAACAACCGTGGAGTGGGCTTGGCCCGGCTCAGGTTGTGGGAGCTGTCGCTTTCCAGAATAGAAAGCTTTCTATACCACCAAACACTTCCCCGTTGGTGTCTTCCCTTATTGAATCTTGCTGGGCAGATGACCCTGTTCAGCGCCCATCATTTGCAAGTATAGTCGAGTCCCTGAAGAAATTGCTCAAATGTCCCCAGCAGTTGATAGTAATGGGAGGAACATTTTGGTGGTTGCATAAGGCTGGAAATAGCCCAGATGAAAGCTCAAGCTTTTTAGTAGTATCCCATAGAAATGCTAAATTCTACATCGATATGCGGGTTTATAACATCGCAAATCCAAATGTAATACAGTTCCTCCAATATTACTGGGAAGTGGAACCTATTTTTACTGCCAACTGCATTGTTCCACAACTCGCTTGTAATCTTTATGAACCCGCACACAGGAACAATGTTCTCCTCCGTGGGAAATTGTCTCTGCCCAGCAATTTTGACGAGTCGACAACCGCCTGGAACAAAGGTAAAGGCCTTGTTCATAGTTTCATTCTTTAG 3099 45.72 MPHRTTYFFPRQFPDRGFDSASTSKQILDHEKKINKDTLSTESDAKPTPRPARDFSVTKSSAVSDLFTGDKSQSKKKLPALYDWLVNKKATRSATAHVKTWLSNCDEDRELLLPPPTSEPDHDTKNVEDRSVDRRFDREVSLPRLSSGSSYAGSLFSGTGTGTVDGNFSSDVKDSSVSKILSTRTARPEEIVDGDGEESLAQRTKESYYLQLALAATLRSHASLAGDPVLMEEGRVEITDAETVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNDFEEGRRLPPLMSLKTIEPSETSMEVVLVDRRGDSRLKELEEKAQELYCASENTVVLVEKLGKLVAIYMGGTFPVEQGGLHLHWKVVSKRLREFQQCIVLPIGSLSMGLCRHRAILFKKLADYIGLPCRIAKGCMYCVADHRSSCLVKIEDDKKSLREYVVDLVGEPGNIHGPDSSINGGLQSSMPSPLHISHLKEFQEPYVESCLSRQIVGSKQTCGSPDNPLHSGLGERRMRGGSSLYKNSGTGTDKLVDQAVGVRSSQLCLETKVSEECALQSHILAPTDADASKNLGSVAGASLHENAVVIEEIYRKEEVVVGISLDESSIDPSNLSLSTQIDSKEVESRSRNCSASTHPKYLILEPSLAMDWLEISWDELHIKERVGAGSFGTVHRAEWHGSDVAVKVLSVQDFQDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPSSGELMDQRKRLRMALDVAKGINYLHCLNPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKTDVYSFGVILWELVTMQQPWSGLGPAQVVGAVAFQNRKLSIPPNTSPLVSSLIESCWADDPVQRPSFASIVESLKKLLKCPQQLIVMGGTFWWLHKAGNSPDESSSFLVVSHRNAKFYIDMRVYNIANPNVIQFLQYYWEVEPIFTANCIVPQLACNLYEPAHRNNVLLRGKLSLPSNFDESTTAWNKGKGLVHSFIL 1032
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11809003 11817549 + CmoCh01G015290.1 Cmo01g01529 375012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01529 1032 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 108 922 - -
Cmo01g01529 1032 Gene3D Phosphorylase Kinase; domain 1 647 731 - -
Cmo01g01529 1032 MobiDBLite consensus disorder prediction 19 59 - -
Cmo01g01529 1032 ProSitePatterns Serine/Threonine protein kinases active-site signature. 775 787 IPR008271 GO:0004672|GO:0006468
Cmo01g01529 1032 SUPERFAMILY Protein kinase-like (PK-like) 625 907 IPR011009 -
Cmo01g01529 1032 MobiDBLite consensus disorder prediction 25 40 - -
Cmo01g01529 1032 Pfam Ethylene-responsive protein kinase Le-CTR1 241 449 - -
Cmo01g01529 1032 MobiDBLite consensus disorder prediction 109 129 - -
Cmo01g01529 1032 ProSitePatterns Protein kinases ATP-binding region signature. 660 681 IPR017441 GO:0005524
Cmo01g01529 1032 CDD STKc_MAP3K-like 660 908 - -
Cmo01g01529 1032 MobiDBLite consensus disorder prediction 495 524 - -
Cmo01g01529 1032 ProSiteProfiles Protein kinase domain profile. 654 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo01g01529 1032 PRINTS Tyrosine kinase catalytic domain signature 769 787 IPR001245 GO:0004672|GO:0006468
Cmo01g01529 1032 PRINTS Tyrosine kinase catalytic domain signature 879 901 IPR001245 GO:0004672|GO:0006468
Cmo01g01529 1032 PRINTS Tyrosine kinase catalytic domain signature 835 857 IPR001245 GO:0004672|GO:0006468
Cmo01g01529 1032 PRINTS Tyrosine kinase catalytic domain signature 728 741 IPR001245 GO:0004672|GO:0006468
Cmo01g01529 1032 Pfam Protein tyrosine and serine/threonine kinase 654 908 IPR001245 GO:0004672|GO:0006468
Cmo01g01529 1032 SMART serkin_6 654 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo01g01529 1032 Gene3D Transferase(Phosphotransferase) domain 1 733 918 - -
Cmo01g01529 1032 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 108 922 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01529 Cmo09g00582 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01529 Cmo-Chr1:11809003 Cmo06g00442 Cmo-Chr6:2118798 0 dispersed
Cmo01g01529 Cmo-Chr1:11809003 Cmo09g00582 Cmo-Chr9:2850373 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74061 PF07714 PK_Tyr_Ser-Thr 1.30E-63 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01529 - - csv:101204522 1642.09