Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo01g01613 | ATGCAAATTCAAGACTTTCATTTTCTCCCCTTTTTTCTTCTTCTTCTTCTCTCAACTGGCTGTTTTGCTAAGCTTCACCATAACTATTACCATAATTCATGCCCAAATGTTGAGTCCATTGTGAGAGCTGCAGTGAAGCAGAAGTTTGAACAGACGTTTGTTACTGCTCCCGCTACTCTCCGCCTCTTTTTTCACGATTGTTTTGTTCGGGGCTGTGATGCTTCTGTGCTGCTTCATTCGAATAACCACACTTCTGAGAAAGACAATGCTGAGAATCTTTCGCTCGCCGGAGACGGGTTCGATACTGTAATTAAAGCTAAGGCTGCTGTCGATAGCGTGCCGGAATGTAAGAACAAGGTGTCTTGTGCTGACATATTGGCTCTTGCTACTAGAGATGTTGTAGCTTTGACAGGAGGGCCGTCGTATGCGGTGGAGTTGGGAAGGCGAGACGGGCGGATCTCGACACGAAAGAGCGTTCGACACCATCTTCCTTTACCTGATTTTGGATTGGATCAGCTGAATGCCATGTTTGCAAGACATGGTCTATCTCAAACAGACATGATTGCTCTCTCAGGTGCACATACAATTGGGTTCTCACACTGCAAGCACTTCTCCAAAAGGCTATATAGCTTCCACAGCAAAAACCGAATCGACCCGACGTTCAACCCGAGGTACGTCGACGAGCTCAAGAGGGAATGCCCGAGGAACGTGGACCAGAGAATTGCTGTGGACATGGACTCGAGGTCGTCGTTGACGTTCGACAACGTGTACTTCAAGAATTTGCAGATGGGAAAAGGGCTGTTCACCTCAGACCAAGTGTTGTTCACAGATAGAAGATCAAGGGAAACAGTGAACTTATTTGCTTCCAACAATTCAGCCTTTGAAGAGGCTTTTGTGGTTGCAATGAAAAAGCTTGGGAGAGTGGGAGTCAAAACAAGAAACCAAGGGGAGATCAGAATTGACTGTTCTTCACTCAACTAA | 981 | 46.18 | MQIQDFHFLPFFLLLLLSTGCFAKLHHNYYHNSCPNVESIVRAAVKQKFEQTFVTAPATLRLFFHDCFVRGCDASVLLHSNNHTSEKDNAENLSLAGDGFDTVIKAKAAVDSVPECKNKVSCADILALATRDVVALTGGPSYAVELGRRDGRISTRKSVRHHLPLPDFGLDQLNAMFARHGLSQTDMIALSGAHTIGFSHCKHFSKRLYSFHSKNRIDPTFNPRYVDELKRECPRNVDQRIAVDMDSRSSLTFDNVYFKNLQMGKGLFTSDQVLFTDRRSRETVNLFASNNSAFEEAFVVAMKKLGRVGVKTRNQGEIRIDCSSLN | 326 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 12314623 | 12315998 | - | CmoCh01G016130.1 | Cmo01g01613 | 375096 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo01g01613 | 326 | PANTHER | - | 5 | 326 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo01g01613 | 326 | CDD | secretory_peroxidase | 24 | 323 | IPR033905 | GO:0004601|GO:0042744 | |
Cmo01g01613 | 326 | Gene3D | Peroxidase, domain 2 | 164 | 305 | - | - | |
Cmo01g01613 | 326 | PRINTS | Haem peroxidase superfamily signature | 56 | 70 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo01g01613 | 326 | PRINTS | Haem peroxidase superfamily signature | 120 | 137 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo01g01613 | 326 | PRINTS | Haem peroxidase superfamily signature | 138 | 150 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo01g01613 | 326 | PRINTS | Haem peroxidase superfamily signature | 186 | 201 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo01g01613 | 326 | PRINTS | Haem peroxidase superfamily signature | 246 | 261 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo01g01613 | 326 | ProSitePatterns | Peroxidases active site signature. | 56 | 67 | IPR019794 | GO:0004601 | |
Cmo01g01613 | 326 | Gene3D | - | 28 | 326 | - | - | |
Cmo01g01613 | 326 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 186 | 196 | IPR019793 | - | |
Cmo01g01613 | 326 | PRINTS | Plant peroxidase signature | 34 | 53 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo01g01613 | 326 | PRINTS | Plant peroxidase signature | 58 | 78 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo01g01613 | 326 | PRINTS | Plant peroxidase signature | 98 | 111 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo01g01613 | 326 | PRINTS | Plant peroxidase signature | 119 | 129 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo01g01613 | 326 | PRINTS | Plant peroxidase signature | 138 | 153 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo01g01613 | 326 | PRINTS | Plant peroxidase signature | 185 | 197 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo01g01613 | 326 | PRINTS | Plant peroxidase signature | 244 | 259 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo01g01613 | 326 | PRINTS | Plant peroxidase signature | 260 | 277 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo01g01613 | 326 | PRINTS | Plant peroxidase signature | 300 | 313 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo01g01613 | 326 | PANTHER | PEROXIDASE | 5 | 326 | - | - | |
Cmo01g01613 | 326 | Pfam | Peroxidase | 41 | 290 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo01g01613 | 326 | ProSiteProfiles | Plant heme peroxidase family profile. | 24 | 326 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo01g01613 | 326 | SUPERFAMILY | Heme-dependent peroxidases | 25 | 326 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g01613 | Cmo-Chr1:12314623 | Cmo20g01019 | Cmo-Chr20:6692431 | 4.42E-148 | dispersed | |
Cmo01g01613 | Cmo-Chr1:12314623 | Cmo03g00964 | Cmo-Chr3:7235220 | 2.36E-148 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo01g01613 | K00430 | - | csv:101218982 | 580.867 |