Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01628 ATGGCACCGAGATTGGGGTTTTTGTGTTGGTGGGGAACGGAGAAGGACTCTCAAAAGGGAACTCCGGTGGTTGTGACGATGGAGAAACCCAACTTCTCCGTCGTGGAGATCGACGGTCCTGACGCCGCATTCCGGCCGGTGGAAAAAAGTAGAGGCAAAAATGCTAAACAAGTCACATGGGTTCTTCTTTTAAAGGCCAATCGAGCTGTCGGTTGCATTACTTGGCTTGTTACAGTCCTCTGGGCCTTATTGGGAACAATCAAGAAGAGGCTGATCTACAGGCAAGGAGTCGCCATTGAAGACGGGAAGTTGGGAAGAGGGAGGTTACTGTTTGGAGTAATTAGAGCTTTCTTAGTGACTTCCATGGCGATTCTTGCTTTTGAAATGCTTGCTTATTTCAGAGGCTGGCATTATTTTCAGAATCCTAATCTCCACATTCCTCAGGCTTCTGATTTGCAAGGATTGCTTCATTCACTCTATGTTGCTTGGTTAACTTTTAGAGCAGACTACATTGCTCCTCTCATTCAAACACTCTCTAAATTTTGCATTGTTTTGTTCCTTATCCAATCAGTGGATCGTATGATCCTTTGTTTTGGTTGCTTGTGGATAAAGTGCAAAAGAATTGAACCCAAGATTCAAGGGGATCCCTTCAGGTTGGATGATGTGGAGGGAGCTGGACACAAGTATCCAATGGTTCTTGTTCAAATTCCCATGTGCAACGAGCGCGAGTCTATCAAGATTATGTTAGATTCTGAATATAAATGGCTTTACGACGATTTCGTGCAGGTTTACGAGCAGTCTATCTCTGCAGTCTGTCAGATCGATTGGCCAAGGGACCGTTTACTAATTCAAGTTCTTGATGATTCTGATGATGAGAACATTCAAGTGCTAATTAAGGCAGAGGTTGCTAAATGGAGCCAAAAGGGAGTGAACATAATCTATCACCATCGATTAATAAGAACAGGATATAAAGCTGGGAATCTCAAGTCTGCAATGAGTTGTGACTATGTTAGAGACTATGAATTTGTAGCAATTTTTGATGCTGACTTTCAACCAAATCCAGATTTTCTTAAACTCACAGTTCCTCATTTCAAGGATAACCCGGAGCTCGGTTTGGTTCAGGCCAGATGGTCTTTCGTGAACAAGGACGAAAACTTGCTGACACGTCTTCAGAACATTAACTTGTGTTTCCATTTTGAGGTAGAACAGCAGGTTAATGGAGTGTTTCTTAATTTCTTCGGTTTCAATGGCACTGCTGGTGTTTGGAGAATTAAAGCCCTCGAGGAGTCCGGAGGATGGCTCGAAAGAACAACAGTAGAGGATATGGATATAGCTGTGAGAGCCCATCTTAACGGCTGGAAATTTGTATTTCTAAACGACGTTAAGGTTCTTTGTGAAGTTCCCGAGTCGTATGAAGCATATAGGAAGCAGCAACATCGTTGGCATTCCGGTCCTATGCAACTATTTAGGTTGTGTCTTCCAGCAATCATAAGTTCTAAGATAGCAGCATGGAAAAAGGCAAATTTGATACTGATTTTCTTTCTATTAAGGAAGCTCATCCTTCCCTTCTATTCCTTCACGTTGTTCTGCATAATTCTTCCTCTAACCATGTTCGTACCCGAAGCCGAGCTTCCTCTATGGGTAGTCTGCTACGTGCCCGTCTTCATGTCCTTACTCAACATCCTTCCATCCCCAAAATCTTTTCCTTTTATCATCCCCTACCTTCTTTTCGAGAACACTATGTCTGTCACCAAATTCAATGCCATGGTATCTGGCTTATTCCAGCTCGGTAGCTCTTATGAGTGGATTGTGACTAAAAAAGCTGGCCGGTCCTCTGAATCCGACTTACTGGCTACTGCTGAAAGGGACTCGAAGGTAATGAATCAAGCGCTGATCTATAGAGGCGCTTCTGAGAGCGAGCTTTCTGAGTTGAGCCACTTAAAGGAATGCGAAAAAGTAGCCGCTGCACCTGTCAAAAAAGTTAACAAGATATATCGGAAAGAGCTAGCGCTCGCGTTTCTTTTACTTTTAGCTTCACTCAGGAGTCTCTTGGCTGCACAAGGAGTCCACTTCTACTTCTTGATGTTCCAAGGTGTGACCTTCCTCCTTGTAGGCCTTGATCTAATTGGAGAGCAAATGAGCTAA 2145 43.5 MAPRLGFLCWWGTEKDSQKGTPVVVTMEKPNFSVVEIDGPDAAFRPVEKSRGKNAKQVTWVLLLKANRAVGCITWLVTVLWALLGTIKKRLIYRQGVAIEDGKLGRGRLLFGVIRAFLVTSMAILAFEMLAYFRGWHYFQNPNLHIPQASDLQGLLHSLYVAWLTFRADYIAPLIQTLSKFCIVLFLIQSVDRMILCFGCLWIKCKRIEPKIQGDPFRLDDVEGAGHKYPMVLVQIPMCNERESIKIMLDSEYKWLYDDFVQVYEQSISAVCQIDWPRDRLLIQVLDDSDDENIQVLIKAEVAKWSQKGVNIIYHHRLIRTGYKAGNLKSAMSCDYVRDYEFVAIFDADFQPNPDFLKLTVPHFKDNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFVFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIISSKIAAWKKANLILIFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPLWVVCYVPVFMSLLNILPSPKSFPFIIPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRSSESDLLATAERDSKVMNQALIYRGASESELSELSHLKECEKVAAAPVKKVNKIYRKELALAFLLLLASLRSLLAAQGVHFYFLMFQGVTFLLVGLDLIGEQMS 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12376518 12379832 - CmoCh01G016280.1 Cmo01g01628 375111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01628 714 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 5-RELATED 13 714 - -
Cmo01g01628 714 Pfam Glycosyl transferase family group 2 343 545 IPR001173 -
Cmo01g01628 714 SUPERFAMILY Nucleotide-diphospho-sugar transferases 234 528 IPR029044 -
Cmo01g01628 714 PANTHER - 13 714 - -
Cmo01g01628 714 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 255 468 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01628 Cmo-Chr1:12376518 Cmo15g00330 Cmo-Chr15:1534075 0 dispersed
Cmo01g01628 Cmo-Chr1:12376518 Cmo09g00524 Cmo-Chr9:2448784 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01628 - - csv:101217415 1271.53