Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo01g01637 | ATGGATTCAAAGAAGTCTAACAAAATCAGAGACATCGTTAGGCTTCAACAGATCCTGAAGAAGTGGCGGAAGTTGGCGAACTCATCAAAGACGGCGAATAGATACTCCGGCACGGCGGCGGGATCTGGCGGAAAGAGCATGAAGTTTCTGAAGCGGACGCTCTCAGCCGGATGCGATGTTTCCGGCGCGTCCGTACCGAAAGGATCTTTGGCGGTGAGCGTCGGTGAGGAGCAAAAGCGATTTGTGATTCCGACGCAGTACTTAGGGCATCCGGCGTTTGAGATTCTGTTAAGAGAGGCGGAGGAGGAGTTCGGATTTCAACAAACTGGAGTTCTGAGGCTGCCTTGTGAGGTAACGGTGTTTGAACATGTGGTGAGATTGGTGGAGAGGAAGAAGGGAGATTTGTTCGGCGGAGAGGAAGTTTTGAGCCTTTGTTCGTTGGAATCGCTGCTGCTTACGCCGTCGCACCGTCCGCAGAGTCCAATGTGCAGATAG | 495 | 52.32 | MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSMKFLKRTLSAGCDVSGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVFEHVVRLVERKKGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR | 164 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 12425023 | 12425517 | - | CmoCh01G016370.1 | Cmo01g01637 | 375120 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo01g01637 | 164 | PANTHER | SAUR FAMILY PROTEIN | 6 | 164 | - | - | |
| Cmo01g01637 | 164 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 6 | 164 | IPR003676 | GO:0009733 | |
| Cmo01g01637 | 164 | Pfam | Auxin responsive protein | 21 | 127 | IPR003676 | GO:0009733 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo01g01637 | Cmo-Chr1:12425023 | Cmo17g00605 | Cmo-Chr17:6414979 | 1.19E-40 | dispersed | |
| Cmo06g00486 | Cmo-Chr6:2342169 | Cmo01g01637 | Cmo-Chr1:12425023 | 6.84E-19 | dispersed | |
| Cmo07g00879 | Cmo-Chr7:4159823 | Cmo01g01637 | Cmo-Chr1:12425023 | 4.28E-20 | dispersed | |
| Cmo11g01766 | Cmo-Chr11:12444671 | Cmo01g01637 | Cmo-Chr1:12425023 | 3.01E-10 | dispersed | |
| Cmo19g00785 | Cmo-Chr19:7868872 | Cmo01g01637 | Cmo-Chr1:12425023 | 4.30E-10 | dispersed | |
| Cmo04g01987 | Cmo-Chr4:10292259 | Cmo01g01637 | Cmo-Chr1:12425023 | 7.73E-26 | transposed | |
| Cmo06g00005 | Cmo-Chr6:19348 | Cmo01g01637 | Cmo-Chr1:12425023 | 9.68E-25 | transposed | |
| Cmo01g01637 | Cmo-Chr1:12425023 | Cmo09g00532 | Cmo-Chr9:2512941 | 5.88E-81 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo01g01637 | K14488 | - | csv:101216710 | 242.662 |