Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01653 ATGGATAGGCTCTGTTGTTTTAATGCTTCATACTCTCGGATTAGATCGGCGTTAAACTACGGTAAAGGAAGAAGCCACGAGGGGCTTATCAAGTACGGGTTCTGCCTGGTAAAAGGGAAAGCTAATCATCCCATGGAAGATTACCATGTTGCTAAGTTTGTTCAGATTCAAGAACATGAACTGGGGCTCTTTGCCATTTACGATGGCCATTTAGGAGAAAATGTGCCTGCCTATTTACAAAAGCATTTGTTTTCTAATATCCTGAAGGAGGACGAGTTTTGGGTCGATCCCAACGGCTCCATCTCGAAAGCCTATGAGAAGACAGACCAAGCCATTCTATCCCACAGCTCCGACTTGGGTCGTGGTGGATCAACTGCAGTTAATGCTATTCTGATTAACGGTCGACGATTATGGGTGGCCAATGTTGGAGATTCTCGTGCAGTTCTTTCAAGAGGGGGTGAAGCTATACAGATGAGCATCGACCATGAGCCGAGTACGGAGCGTGGCATCATTGAGAATAAAGGGGGTTTCGTTTCGAACATGCCAGGAGACGTACCTCGAGTGAATGGTCAGCTAGCAGTGTCACGAGCATTTGGAGACAAGAGTCTCAAATCTCACCTGCGATCGGATCCCGATATACAAGATATCATTATAGATGCCAACATGGACGTATTAATTCTCGCCAGTGACGGTCTATGGAAGGTAATGGCGAATCAAGAAGCGGTTGATATCGCTCGAAGAATCAAAGACCCATTGAAGGCTGCTAAGCAGTTAATAACTGAGGCTTTGCAGAAAGAGAGTAAAGATGATATATCATGCATTGTGGTTAGATTTAGGTGA 840 45.12 MDRLCCFNASYSRIRSALNYGKGRSHEGLIKYGFCLVKGKANHPMEDYHVAKFVQIQEHELGLFAIYDGHLGENVPAYLQKHLFSNILKEDEFWVDPNGSISKAYEKTDQAILSHSSDLGRGGSTAVNAILINGRRLWVANVGDSRAVLSRGGEAIQMSIDHEPSTERGIIENKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQDIIIDANMDVLILASDGLWKVMANQEAVDIARRIKDPLKAAKQLITEALQKESKDDISCIVVRFR 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12520186 12523080 + CmoCh01G016530.1 Cmo01g01653 375136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01653 279 SUPERFAMILY PP2C-like 26 278 IPR036457 -
Cmo01g01653 279 Pfam Protein phosphatase 2C 40 271 IPR001932 -
Cmo01g01653 279 PANTHER PROTEIN PHOSPHATASE 2C 10-RELATED 10 278 - -
Cmo01g01653 279 SMART PP2C_SIG_2 42 278 IPR001932 -
Cmo01g01653 279 ProSiteProfiles PPM-type phosphatase domain profile. 31 278 IPR001932 -
Cmo01g01653 279 SMART PP2C_4 23 276 IPR001932 -
Cmo01g01653 279 Gene3D - 26 279 IPR036457 -
Cmo01g01653 279 CDD PP2Cc 30 278 IPR001932 -
Cmo01g01653 279 PANTHER PROTEIN PHOSPHATASE 2C 10 278 IPR015655 GO:0004722|GO:0006470
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01653 Cmo09g00547 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01653 Cmo-Chr1:12520186 Cmo04g00421 Cmo-Chr4:2094354 6.96E-150 dispersed
Cmo01g01653 Cmo-Chr1:12520186 Cmo09g00547 Cmo-Chr9:2610033 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01653 K17506 - csv:101213414 524.628