Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo01g01653 | ATGGATAGGCTCTGTTGTTTTAATGCTTCATACTCTCGGATTAGATCGGCGTTAAACTACGGTAAAGGAAGAAGCCACGAGGGGCTTATCAAGTACGGGTTCTGCCTGGTAAAAGGGAAAGCTAATCATCCCATGGAAGATTACCATGTTGCTAAGTTTGTTCAGATTCAAGAACATGAACTGGGGCTCTTTGCCATTTACGATGGCCATTTAGGAGAAAATGTGCCTGCCTATTTACAAAAGCATTTGTTTTCTAATATCCTGAAGGAGGACGAGTTTTGGGTCGATCCCAACGGCTCCATCTCGAAAGCCTATGAGAAGACAGACCAAGCCATTCTATCCCACAGCTCCGACTTGGGTCGTGGTGGATCAACTGCAGTTAATGCTATTCTGATTAACGGTCGACGATTATGGGTGGCCAATGTTGGAGATTCTCGTGCAGTTCTTTCAAGAGGGGGTGAAGCTATACAGATGAGCATCGACCATGAGCCGAGTACGGAGCGTGGCATCATTGAGAATAAAGGGGGTTTCGTTTCGAACATGCCAGGAGACGTACCTCGAGTGAATGGTCAGCTAGCAGTGTCACGAGCATTTGGAGACAAGAGTCTCAAATCTCACCTGCGATCGGATCCCGATATACAAGATATCATTATAGATGCCAACATGGACGTATTAATTCTCGCCAGTGACGGTCTATGGAAGGTAATGGCGAATCAAGAAGCGGTTGATATCGCTCGAAGAATCAAAGACCCATTGAAGGCTGCTAAGCAGTTAATAACTGAGGCTTTGCAGAAAGAGAGTAAAGATGATATATCATGCATTGTGGTTAGATTTAGGTGA | 840 | 45.12 | MDRLCCFNASYSRIRSALNYGKGRSHEGLIKYGFCLVKGKANHPMEDYHVAKFVQIQEHELGLFAIYDGHLGENVPAYLQKHLFSNILKEDEFWVDPNGSISKAYEKTDQAILSHSSDLGRGGSTAVNAILINGRRLWVANVGDSRAVLSRGGEAIQMSIDHEPSTERGIIENKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQDIIIDANMDVLILASDGLWKVMANQEAVDIARRIKDPLKAAKQLITEALQKESKDDISCIVVRFR | 279 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 12520186 | 12523080 | + | CmoCh01G016530.1 | Cmo01g01653 | 375136 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo01g01653 | 279 | SUPERFAMILY | PP2C-like | 26 | 278 | IPR036457 | - | |
Cmo01g01653 | 279 | Pfam | Protein phosphatase 2C | 40 | 271 | IPR001932 | - | |
Cmo01g01653 | 279 | PANTHER | PROTEIN PHOSPHATASE 2C 10-RELATED | 10 | 278 | - | - | |
Cmo01g01653 | 279 | SMART | PP2C_SIG_2 | 42 | 278 | IPR001932 | - | |
Cmo01g01653 | 279 | ProSiteProfiles | PPM-type phosphatase domain profile. | 31 | 278 | IPR001932 | - | |
Cmo01g01653 | 279 | SMART | PP2C_4 | 23 | 276 | IPR001932 | - | |
Cmo01g01653 | 279 | Gene3D | - | 26 | 279 | IPR036457 | - | |
Cmo01g01653 | 279 | CDD | PP2Cc | 30 | 278 | IPR001932 | - | |
Cmo01g01653 | 279 | PANTHER | PROTEIN PHOSPHATASE 2C | 10 | 278 | IPR015655 | GO:0004722|GO:0006470 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo01g01653 | Cmo09g00547 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g01653 | Cmo-Chr1:12520186 | Cmo04g00421 | Cmo-Chr4:2094354 | 6.96E-150 | dispersed | |
Cmo01g01653 | Cmo-Chr1:12520186 | Cmo09g00547 | Cmo-Chr9:2610033 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo01g01653 | K17506 | - | csv:101213414 | 524.628 |