Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01654 ATGGTTGAGGAAATGAGGAAAATTGTGAAGTTAAACGTGGAATTGACAGTGGAAGAGAGAAATCTGCTTTCTGTTGGCTATAGGAATGTAATAGGAGCTAGACGAGCTTCATGGCGCATTCTGTCTTCAATTGAACAGAAGGAGATAACCAAACATAATGAGAAGAATGTGGAACGGATAATTGAGTATAGGCATCGGGTAGAAGATGAGCTCTCTAAAATATGCAATGACACATTGTCAAATATTGACCAGCATCTCCTTCCAAGTTCATCAGCTGGAGAATCTACTGTATTCTACCATAAGATGAAAGGAGATTATTGTCGGTATTTGGCAGAGTTTAAATCTGGTGATGAGCGTAAACAAGTTGCAGAACAGTCATTAAAGGCTTATGAGGCTGCTTCGACTATTGCTAACTCTGATTTGCCTCCCACTCATCCTATAAGACTTGGCCTGGCTCTGAACTTCTCTGTTTTCTACTATGAGATTTTGAATTCCCCTGAAAGGGCTTGCCACCTTGCCCAGATCGCCTTTGATGAGGCCATTGCAGAACTTGGCAGTCTCAATGAAGATTCCTACAAGGACAGTTCCCTCATTTTGCAGCTTCTCAGGGACAATCTAACCCTGTGGACTTCCAATTTGCCAGACGAAGGTGGGGCAAATTCTTTATTTCTGTCTATCTTTTGGTTCTACGTTGCTGTTTTACTCCATAACAATATAGTTTAA 723 41.22 MVEEMRKIVKLNVELTVEERNLLSVGYRNVIGARRASWRILSSIEQKEITKHNEKNVERIIEYRHRVEDELSKICNDTLSNIDQHLLPSSSAGESTVFYHKMKGDYCRYLAEFKSGDERKQVAEQSLKAYEAASTIANSDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAQIAFDEAIAELGSLNEDSYKDSSLILQLLRDNLTLWTSNLPDEGGANSLFLSIFWFYVAVLLHNNIV 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12526061 12528402 - CmoCh01G016540.1 Cmo01g01654 375137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01654 240 SMART 1433_4 1 223 IPR023410 -
Cmo01g01654 240 PANTHER 14-3-3 PROTEIN 1 219 IPR000308 -
Cmo01g01654 240 Gene3D - 1 220 IPR036815 -
Cmo01g01654 240 PANTHER 14-3-3-LIKE PROTEIN GF14 OMICRON 1 219 - -
Cmo01g01654 240 Pfam 14-3-3 protein 1 210 IPR023410 -
Cmo01g01654 240 PRINTS 14-3-3 protein zeta signature 156 182 IPR000308 -
Cmo01g01654 240 PRINTS 14-3-3 protein zeta signature 94 116 IPR000308 -
Cmo01g01654 240 PRINTS 14-3-3 protein zeta signature 63 87 IPR000308 -
Cmo01g01654 240 PRINTS 14-3-3 protein zeta signature 14 43 IPR000308 -
Cmo01g01654 240 PRINTS 14-3-3 protein zeta signature 129 155 IPR000308 -
Cmo01g01654 240 PRINTS 14-3-3 protein zeta signature 183 212 IPR000308 -
Cmo01g01654 240 SUPERFAMILY 14-3-3 protein 2 217 IPR036815 -
Cmo01g01654 240 PIRSF 14-3-3 1 221 IPR000308 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01654 Cmo05g00524 CCT
Cmo01g01654 Cmo05g00524 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01654 Cmo-Chr1:12526061 Cmo19g01060 Cmo-Chr19:9198427 6.38E-121 dispersed
Cmo01g01654 Cmo-Chr1:12526061 Cmo05g00524 Cmo-Chr5:2530297 7.27E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01654 K06630 - csv:101213169 380.178