Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo01g01654 | ATGGTTGAGGAAATGAGGAAAATTGTGAAGTTAAACGTGGAATTGACAGTGGAAGAGAGAAATCTGCTTTCTGTTGGCTATAGGAATGTAATAGGAGCTAGACGAGCTTCATGGCGCATTCTGTCTTCAATTGAACAGAAGGAGATAACCAAACATAATGAGAAGAATGTGGAACGGATAATTGAGTATAGGCATCGGGTAGAAGATGAGCTCTCTAAAATATGCAATGACACATTGTCAAATATTGACCAGCATCTCCTTCCAAGTTCATCAGCTGGAGAATCTACTGTATTCTACCATAAGATGAAAGGAGATTATTGTCGGTATTTGGCAGAGTTTAAATCTGGTGATGAGCGTAAACAAGTTGCAGAACAGTCATTAAAGGCTTATGAGGCTGCTTCGACTATTGCTAACTCTGATTTGCCTCCCACTCATCCTATAAGACTTGGCCTGGCTCTGAACTTCTCTGTTTTCTACTATGAGATTTTGAATTCCCCTGAAAGGGCTTGCCACCTTGCCCAGATCGCCTTTGATGAGGCCATTGCAGAACTTGGCAGTCTCAATGAAGATTCCTACAAGGACAGTTCCCTCATTTTGCAGCTTCTCAGGGACAATCTAACCCTGTGGACTTCCAATTTGCCAGACGAAGGTGGGGCAAATTCTTTATTTCTGTCTATCTTTTGGTTCTACGTTGCTGTTTTACTCCATAACAATATAGTTTAA | 723 | 41.22 | MVEEMRKIVKLNVELTVEERNLLSVGYRNVIGARRASWRILSSIEQKEITKHNEKNVERIIEYRHRVEDELSKICNDTLSNIDQHLLPSSSAGESTVFYHKMKGDYCRYLAEFKSGDERKQVAEQSLKAYEAASTIANSDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAQIAFDEAIAELGSLNEDSYKDSSLILQLLRDNLTLWTSNLPDEGGANSLFLSIFWFYVAVLLHNNIV | 240 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 12526061 | 12528402 | - | CmoCh01G016540.1 | Cmo01g01654 | 375137 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo01g01654 | 240 | SMART | 1433_4 | 1 | 223 | IPR023410 | - | |
Cmo01g01654 | 240 | PANTHER | 14-3-3 PROTEIN | 1 | 219 | IPR000308 | - | |
Cmo01g01654 | 240 | Gene3D | - | 1 | 220 | IPR036815 | - | |
Cmo01g01654 | 240 | PANTHER | 14-3-3-LIKE PROTEIN GF14 OMICRON | 1 | 219 | - | - | |
Cmo01g01654 | 240 | Pfam | 14-3-3 protein | 1 | 210 | IPR023410 | - | |
Cmo01g01654 | 240 | PRINTS | 14-3-3 protein zeta signature | 156 | 182 | IPR000308 | - | |
Cmo01g01654 | 240 | PRINTS | 14-3-3 protein zeta signature | 94 | 116 | IPR000308 | - | |
Cmo01g01654 | 240 | PRINTS | 14-3-3 protein zeta signature | 63 | 87 | IPR000308 | - | |
Cmo01g01654 | 240 | PRINTS | 14-3-3 protein zeta signature | 14 | 43 | IPR000308 | - | |
Cmo01g01654 | 240 | PRINTS | 14-3-3 protein zeta signature | 129 | 155 | IPR000308 | - | |
Cmo01g01654 | 240 | PRINTS | 14-3-3 protein zeta signature | 183 | 212 | IPR000308 | - | |
Cmo01g01654 | 240 | SUPERFAMILY | 14-3-3 protein | 2 | 217 | IPR036815 | - | |
Cmo01g01654 | 240 | PIRSF | 14-3-3 | 1 | 221 | IPR000308 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo01g01654 | Cmo05g00524 | CCT | |
Cmo01g01654 | Cmo05g00524 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g01654 | Cmo-Chr1:12526061 | Cmo19g01060 | Cmo-Chr19:9198427 | 6.38E-121 | dispersed | |
Cmo01g01654 | Cmo-Chr1:12526061 | Cmo05g00524 | Cmo-Chr5:2530297 | 7.27E-130 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo01g01654 | K06630 | - | csv:101213169 | 380.178 |