Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01685 ATGTCGGGTGCGTGGGAAGACAATCACAATGATACCGACTCCGATCATCATTCCCACATCAATTTCGATTTCTTCTCCGCCATTGTTAAGCCGAAGGATTATTACAAAATTTTGGAGGTCGGTTACGACGCTACGGACGATGAAATTCGTTCCAATTACATACGCCTGGCTCTGAAATGGCATCCTGACAAGAAGAAAGACCACGACGGTGCCACTTCCAGATTTCAGGAAATAAACGAGGCATATGAAGTTTTAAGCGATCCTTGTAGGAGGCAGGAATACGACGAGAAGGGAATGCTTTATGTAAACGATGATAACATAGTGGATTATCTCAAGCGATACAAAGGCCTTATTTTGACCTGTAATGGCCTTGGGACGGTTCTCAGCTTGGAGCGTGAAAATTGTAGAATGATCGGAACCTTCACTGCTGCAACTGCAGATAATCGGTCGGAGTTTGTTATACGCTAG 468 44.44 MSGAWEDNHNDTDSDHHSHINFDFFSAIVKPKDYYKILEVGYDATDDEIRSNYIRLALKWHPDKKKDHDGATSRFQEINEAYEVLSDPCRRQEYDEKGMLYVNDDNIVDYLKRYKGLILTCNGLGTVLSLERENCRMIGTFTAATADNRSEFVIR 155
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12699067 12703928 - CmoCh01G016850.1 Cmo01g01685 375168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01685 155 ProSitePatterns Nt-dnaJ domain signature. 75 94 IPR018253 -
Cmo01g01685 155 Gene3D DnaJ domain 25 112 IPR036869 -
Cmo01g01685 155 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 6 126 - -
Cmo01g01685 155 ProSiteProfiles dnaJ domain profile. 33 98 IPR001623 -
Cmo01g01685 155 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 6 126 - -
Cmo01g01685 155 CDD DnaJ 33 87 IPR001623 -
Cmo01g01685 155 SUPERFAMILY Chaperone J-domain 28 113 IPR036869 -
Cmo01g01685 155 SMART dnaj_3 32 90 IPR001623 -
Cmo01g01685 155 Pfam DnaJ domain 33 95 IPR001623 -
Cmo01g01685 155 PRINTS DnaJ domain signature 70 90 IPR001623 -
Cmo01g01685 155 PRINTS DnaJ domain signature 53 68 IPR001623 -
Cmo01g01685 155 PRINTS DnaJ domain signature 90 109 IPR001623 -
Cmo01g01685 155 PRINTS DnaJ domain signature 35 53 IPR001623 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01685 Cmo12g00144 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01685 Cmo-Chr1:12699067 Cmo05g00584 Cmo-Chr5:2890468 2.63E-60 dispersed
Cmo01g01685 Cmo-Chr1:12699067 Cmo12g00144 Cmo-Chr12:908622 1.09E-56 wgd
Cmo01g01685 Cmo-Chr1:12699067 Cmo05g00549 Cmo-Chr5:2650744 1.98E-15 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01685 - - csv:101206591 219.55