Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01722 ATGGCTTGCATGCTTTATAATCATAGACATAATATGAACGGTCCTGACATGATTACTCTTGTTCAGGCTCACGGCCTCTCTAGGGATCACAAGCCTGATCTTGAGATTGAGAGGGACAGAATTCTTAAAGCTGGTGGTTTTATTCATGCTGGACGGGTCAATGGTAGCTTGAACCTTGCCAGAGCTATTGGTGATATGGAATTTAAGCAGAATAAATTTTTACCTGCTGAAAAGCAGATTATCACTGCAAATCCTGATGTAACCACTGTTGAGCTTTGCGACGATGACGAGTTTATTGTGATAGCCTGTGACGGGATATGGGATTGCATGTCTAACCAGCAGCTAGTAGATTTTATACATGAACAGCTACAATCAGTAAAGAGAGTACTCGATAATTGTTTGGCACCTTCCACAGCTGGTGGCGAGGGATGTGATAACATGACCATGATTTTGGTGCAGCTTAAGAAAGATATCCGATCAAACTCCTCTGTCGACGAGCAAACTTCACCCGCTACCGCTACCGCTACTGCCACCACCAAACCAGACAGTACCAAATCGAAGGAAGGAGATGAATCGAACTACTATAAACTCCAAAACATATTAGAATTGGCGATCTGCATCATAGTGTTGCTTATGAATATCTTGTTCTTTGATATCTAA 660 42.12 MACMLYNHRHNMNGPDMITLVQAHGLSRDHKPDLEIERDRILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIITANPDVTTVELCDDDEFIVIACDGIWDCMSNQQLVDFIHEQLQSVKRVLDNCLAPSTAGGEGCDNMTMILVQLKKDIRSNSSVDEQTSPATATATATTKPDSTKSKEGDESNYYKLQNILELAICIIVLLMNILFFDI 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12898714 12902069 - CmoCh01G017220.1 Cmo01g01722 375205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01722 219 MobiDBLite consensus disorder prediction 162 190 - -
Cmo01g01722 219 ProSiteProfiles PPM-type phosphatase domain profile. 1 154 IPR001932 -
Cmo01g01722 219 SUPERFAMILY PP2C-like 22 155 IPR036457 -
Cmo01g01722 219 PANTHER PROTEIN PHOSPHATASE 2C 16 167 IPR015655 GO:0004722|GO:0006470
Cmo01g01722 219 SMART PP2C_4 1 152 IPR001932 -
Cmo01g01722 219 Pfam Protein phosphatase 2C 24 127 IPR001932 -
Cmo01g01722 219 Gene3D - 3 187 IPR036457 -
Cmo01g01722 219 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 16 167 - -
Cmo01g01722 219 MobiDBLite consensus disorder prediction 162 182 - -
Cmo01g01722 219 CDD PP2Cc 22 154 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01722 Cmo-Chr1:12898714 Cmo17g00873 Cmo-Chr17:7972189 2.54E-75 dispersed
Cmo01g01722 Cmo-Chr1:12898714 Cmo08g00579 Cmo-Chr8:3546049 7.32E-79 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01722 K17499 - csv:101211604 275.789