Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01729 ATGGCTAAAGCGGCGTCGTGTTGGAAGATATCCCGCAAGTTTTTTGTTCTTCTGGGTTTGTTTCTTCCGGCCACGGCGGCCTTATCCTTCGGTTTCTATTCTGCCACGTGTCCTGTGGCGGAGTTGATTGTAAAGAATGCCGTCAGATCGGCTTCCTCCGAGGACCCCACCGTCCCCGGGAAGCTCCTCCGATTGATGTTCCATGACTGTTTCGTCGAGGGGTGTGACGCTTCTATATTACTTCAAGGAAACAAAACAGAACGAACTGATCCAGCAAACAGATCTCTTGGAGGATTTGAAGCGATCGATTCCGCTAAAAGAACTCTAGAATTTTTTTGTCTCGGAATTGTTTCTTGTGCCGACGTCATTGTTTTGGCCGCTAGAGATGCCGTTGAATTCGCCGGCGGGCCCTCCGTCGAAGTCCCAACCGGCCGACGAGATGGAAGGATATCGGCGGCGACAAACGTCCGACCAAACATCGTCGACACAAGCTTTTCAGTCGACCAAATGATGAGTCTCTTCTCATCAAAAGGGCTGTCGGCAGACGATCTTGTCATACTCTCAGGAGCTCACACAATCGGAACCGCCCACTGTAGCGCCTTCAGCGACCGCTTCAGAAAGGGTCCAAACGGGCAGATGACCCTCATCGACGCTTCTCTCGACGGCACTTACGCCAACGAGCTTATGCGGCGGTGCCCCGCCGGAGCCGCCTCCACCGTCGTCGTTGACAACGATCCGGCGACGGCGAATGTCTTCGACAATCAGTACTACAAAAACATTCTGTCGCACAAGGGGCTGTTTCAGTCGGATTCCGTTCTGATTAGCGACGGCCGGACCAGGGCCCACGTGGAGAGATTTGCTAAGGATCAGATTGGGTTTTTTGAGAACTGGGGTCAGTCGTTCTTGAAACTTAGTAGTGTTGGAGTTAAAAGTGGGGGCGAAGGGGAAATTAGACTGTCTTGTTCTACTAATAATGTCTGA 981 52.09 MAKAASCWKISRKFFVLLGLFLPATAALSFGFYSATCPVAELIVKNAVRSASSEDPTVPGKLLRLMFHDCFVEGCDASILLQGNKTERTDPANRSLGGFEAIDSAKRTLEFFCLGIVSCADVIVLAARDAVEFAGGPSVEVPTGRRDGRISAATNVRPNIVDTSFSVDQMMSLFSSKGLSADDLVILSGAHTIGTAHCSAFSDRFRKGPNGQMTLIDASLDGTYANELMRRCPAGAASTVVVDNDPATANVFDNQYYKNILSHKGLFQSDSVLISDGRTRAHVERFAKDQIGFFENWGQSFLKLSSVGVKSGGEGEIRLSCSTNNV 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12933561 12935278 + CmoCh01G017290.1 Cmo01g01729 375212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01729 326 CDD secretory_peroxidase 28 322 IPR033905 GO:0004601|GO:0042744
Cmo01g01729 326 Pfam Peroxidase 44 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g01729 326 Gene3D - 31 325 - -
Cmo01g01729 326 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g01729 326 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g01729 326 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g01729 326 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g01729 326 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g01729 326 ProSiteProfiles Plant heme peroxidase family profile. 27 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo01g01729 326 Gene3D Peroxidase, domain 2 161 304 - -
Cmo01g01729 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Cmo01g01729 326 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g01729 326 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g01729 326 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g01729 326 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g01729 326 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g01729 326 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g01729 326 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g01729 326 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g01729 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo01g01729 326 SUPERFAMILY Heme-dependent peroxidases 28 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo01g01729 326 PANTHER PEROXIDASE 18-RELATED 22 323 - -
Cmo01g01729 326 PANTHER PEROXIDASE 25-RELATED 22 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01729 Cmo09g00394 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01729 Cmo-Chr1:12933561 Cmo07g00403 Cmo-Chr7:1852197 3.54E-82 dispersed
Cmo01g01729 Cmo-Chr1:12933561 Cmo09g00394 Cmo-Chr9:1738150 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01729 K00430 K18328 csv:101211842 518.079