Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01821 ATGGCTCCCTCGTTTGATTGGTGGGGAAAAGACACTCATAGAGGAACTCCTGTTGTTGTGAAGATGGAGAATCCGAATTGGTCGATGGTGGAGCTGGAAGGTCCGTCGGAGGATGATTTTCTCATCGCCGGCGACTCGCCGGCGACTCGGACTAGAGAGAAAGCCCGAGGCAAAAACGCTAAGCAACTCACGTGGGTTCTCCTACTTAAGGCTCATAAGGCTGCTGGTTGTTTAACTTCCATTGGCTCTGCAATGGTGGACCTAGCCGCTGCCGTTAGACGCCGTGTTGCTTCTGGTCGGACTGACGCCGATGACGCCGACAATGACGTCTCTGTTGGAGGCAGAGTGAAAGAGAACCCCACTGTGAAAACGAGATTCTATTCTTGTATCAAAGTGTTTCTATGGCTGTCGGTGCTTTTGTTGGGTTTTGAGATTGCGGCGTTCTTCAAAGGCTGGCATTTTGATACTCCAAAGCTTCATTTGGATTATCTCTGGGCATCGCAGTGGGGCTTTAAAGGAGTTTTTGATTGGATTTACGCTCAATGGGTATTGATTCGAGTGGGTTATTTAGCTCCTCCTCTTCAGTTCTTAGCCAATGCCTGTATCATATTGTTCATCATTCAGAGCTTGGATCGTTTAATCTTATGTCTGGGTTGTTTCTGGATCCGATTCAAGAAAATCCAACCAGTTCTTAAACCTGGAGATTTAGACCTTGAATCCGCCGAAAAGGGCTACTTCCCAATGGTTCTTGTGCAGATCCCCATGTGCAATGAAAAAGAGGTTTATCAGCAATCAATCGCTGCTATCTGCAACTTGGACTGGCCTAGAACCAAGCTGCTAATTCAAGTTCTTGATGACTCTGATGATCCAACAACCCAATTGCTGATACAAGAAGAGGTTCATAAATGGCAGCAAGAGGGCGCCAACATTGTTTATCGTCATAGAATCATTAGAGATGGTTACAAGGCTGGCAACCTCAAATCCGCCATGAATTGTAGCTACGTTAAAGACTATGAATTCGTCGCGATCTTCGACGCCGATTTTCAACCCACACCTGATTTCCTTAAAAGAACTGTTCCTCATTTCAAGGATAATGAGGAGCTGGGGCTGGTTCAAGCAAGATGGTCGTTCGTGAACAAGGATGAGAATTTACTGACCAGGCTGCAGAACGTTAATTTAGCTTTCCATTTTGAAGTAGAGCAGCAAGTTAATAGTGTGTTCCTCAACTTCTTTGGATTCAATGGCACTGCTGGTGTGTGGAGGATCAAAGCCCTCGAGGACGCCGGTGGGTGGTTGGAAAGGACCACGGTCGAGGACATGGATATCGCGGTCCGTGCTCATCTTCATGGATGGAAATTCATATTCCTAAACGACGTCGAGTGCCAATGTGAGCTACCAGAATCTTATGAAGCTTATAGAAAACAACAACATAGATGGCATTCTGGTCCAATGCAATTGTTTCGTCTTTGTCTGCCTGCTATTATTCGATCAAAGATTAGTATATGGAAGAAGTTCAACTTGATCTTCCTCTTCTTTTTGCTCAGAAAATTGATATTGCCCTTCTATTCTTTCACACTTTTCTGCATAATTCTCCCAATGACAATGTTCGTTCCTGAAGCCGAGCTACCCGCGTGGGTCGTTTGCTATATCCCAGCCACGATGTCGTTTCTAAACATCCTACCTGCCCCAAAATCCTTCCCTTTCATTGTCCCTTACCTCCTTTTTGAAAACACCATGTCAGTTACCAAGTTCAATGCCATGATCTCAGGGCTCTTCCAGCTTGGTAGCGCATACGAATGGGTTGTCACGAAGAAATCGGGTCGGTCCTCGGAAGGTGATCTTTTGTCATTGGTAGAGAGAGAGCAAAAGCATCAAAGAGGGGCGTCGGCGCCCGACTTAGAAGAGATGAAGGAAGAGCTTGAGAAACAGGAAAAGAAAGCTTCTTTGCGGAAGAAGCATAACCGAATCTATACAAAAGAGCTGGCATTGGCTTTCCTTCTCTTAACTGCATCAGCACGGAGCCTTCTGTCTGCTCAAGGGATCCATTTCTACTTCTTGCTATTCCAGGGGATCTCGTTCCTGCTCGTCGGTTTGGATTTGATCGGCGAACAAATAGGTTGA 2121 45.92 MAPSFDWWGKDTHRGTPVVVKMENPNWSMVELEGPSEDDFLIAGDSPATRTREKARGKNAKQLTWVLLLKAHKAAGCLTSIGSAMVDLAAAVRRRVASGRTDADDADNDVSVGGRVKENPTVKTRFYSCIKVFLWLSVLLLGFEIAAFFKGWHFDTPKLHLDYLWASQWGFKGVFDWIYAQWVLIRVGYLAPPLQFLANACIILFIIQSLDRLILCLGCFWIRFKKIQPVLKPGDLDLESAEKGYFPMVLVQIPMCNEKEVYQQSIAAICNLDWPRTKLLIQVLDDSDDPTTQLLIQEEVHKWQQEGANIVYRHRIIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQNVNLAFHFEVEQQVNSVFLNFFGFNGTAGVWRIKALEDAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAIIRSKISIWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLLSLVEREQKHQRGASAPDLEEMKEELEKQEKKASLRKKHNRIYTKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQIG 706
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13352801 13356242 + CmoCh01G018210.1 Cmo01g01821 375304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01821 706 Coils Coil 630 653 - -
Cmo01g01821 706 PANTHER - 6 705 - -
Cmo01g01821 706 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 6 705 - -
Cmo01g01821 706 Pfam Glycosyl transferase family group 2 341 536 IPR001173 -
Cmo01g01821 706 SUPERFAMILY Nucleotide-diphospho-sugar transferases 249 527 IPR029044 -
Cmo01g01821 706 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 239 464 IPR029044 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01821 Cmo12g00551 CCT
Cmo01g01821 Cmo09g00311 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01821 Cmo-Chr1:13352801 Cmo09g00524 Cmo-Chr9:2448784 0 dispersed
Cmo08g00242 Cmo-Chr8:1469915 Cmo01g01821 Cmo-Chr1:13352801 4.23E-148 dispersed
Cmo01g01821 Cmo-Chr1:13352801 Cmo12g00551 Cmo-Chr12:3402529 0 wgd
Cmo01g01821 Cmo-Chr1:13352801 Cmo09g00311 Cmo-Chr9:1348139 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01821 - - csv:101204215 1329.69