Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo01g01862 | ATGCATTCAACGATGGAAGAGACACTGTTGTTCTCTAATTTTGAGGTCCCATTGTTGGTCCTCATTTTAGCTCTGCTTCTGATTTTCAAATTCAGAAAAGCGGAGCACAAAAATCTCCCACCCGGCCCACCTTCCCTTCCGGTAATCGGCCACCTTCATCTTTTAAAAGAGCCATTCCACCAAATGCTGCAAGATCTGTCGCAAAAGTACGGTCCAATCCTGTCGCTGTCACTCGGTTTCCGCCCCGTGGTGGTTGTTTCCTCCCCGGCCGCCGCCCAGGAGTGCTTTTCGAAAAACGACATCATATTTGCCAGCCGTCCTCGTATGATTTCCGGGAAGATTCTGAATTATGACTACACTGCCGTTGGTGCTACTGCATACGGACAGCACTGGCGCATCATGCGCCGCATAGCTACCACTGAGCTACTCTCCACGTACCGTCTCAACGCATTAATTAACATCCGACAGCAGGAGGTTAAATTATGGCTCAAAAGTTTATACCGAATTTCGGGCAAAAATAATGTCCGAGTGGAGATAAGGTCCAAATTGACGGAGCTGTCTTTCAATATTGCGTTGATGTTGATGGTTGGGAAGCGTTACTTTGGAGATGAAGCAGTGGATGATAGTGAGGAGGCGAGGGAGTTGAAGAACACAATGAAGCAAGTTCCTCTACTGAGCGGAGCATCGTATCCAGCTGATTTCTTGTCGGTTTTGAAATTGGTCGATTATCAAGGATTCAGGAAGAGGCTGGCTAAGGTGAGGGTGGACGGCGATGCTTTTGCACAAAGTTTGATTGATGAACGTCGGAACAAGAAAGCCGATGACAATGAACGAAAGACCATGATTGATAGTCTGCTGTCCATGCAACAAATGGAACCTGAATATTACAAGGACGATATCATCAAGGGCCAATTCTTGACACTTCTGGCTGCGGGAACTGACACAACAGCGGGAACACTAGAGTGGGCGTTGTCGCTACTCCTCAACCATCCGACCGCGATGAAGAAGGCGTGGACTGAGATAAACGAGCATGTTGGGGACGAACGGCTGGTAGAGGAGATGGATCTTAACCAGCTACACTATCTTCAAGGCATAATCAACGAGACGTATCGCCTATTTCCAGCGCTTCCAATATTGGTTCCACGAGAATCATCTGAAGACTGCACAATTGGAGGGTTTGACGTTCCGAAAGGAACCATGTTAGTGGTGAATGCATGGGCCATCCATCGAGACCCAAAAGTGTGGGAAGATCCCAATAGCTTCCGACCAGAGAGGTTCAAAGAGGGCGAGAGTGTGGAAGTAAGTAAATTGTTGCCATTTGGGATGGGGAGAAGGGCGTGTCCAGGGGCTGGCCTTGCGCACAGAGTGGTGGGGCTGGCGCTGGCCACTCTGATTCAGTGCTTTGAGTGGGAGAGACTCGACAACAAGGAAGTAGACTTGACTCCTGGAATTGGACTCACCATGCCCAAAGCCCGCCCTTTGGTAGCTATGTTCAAACCTCGTGCTCCCATCATTCATTTACTATCACAGCTTTGA | 1536 | 48.83 | MHSTMEETLLFSNFEVPLLVLILALLLIFKFRKAEHKNLPPGPPSLPVIGHLHLLKEPFHQMLQDLSQKYGPILSLSLGFRPVVVVSSPAAAQECFSKNDIIFASRPRMISGKILNYDYTAVGATAYGQHWRIMRRIATTELLSTYRLNALINIRQQEVKLWLKSLYRISGKNNVRVEIRSKLTELSFNIALMLMVGKRYFGDEAVDDSEEARELKNTMKQVPLLSGASYPADFLSVLKLVDYQGFRKRLAKVRVDGDAFAQSLIDERRNKKADDNERKTMIDSLLSMQQMEPEYYKDDIIKGQFLTLLAAGTDTTAGTLEWALSLLLNHPTAMKKAWTEINEHVGDERLVEEMDLNQLHYLQGIINETYRLFPALPILVPRESSEDCTIGGFDVPKGTMLVVNAWAIHRDPKVWEDPNSFRPERFKEGESVEVSKLLPFGMGRRACPGAGLAHRVVGLALATLIQCFEWERLDNKEVDLTPGIGLTMPKARPLVAMFKPRAPIIHLLSQL | 511 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 13529829 | 13532319 | + | CmoCh01G018620.1 | Cmo01g01862 | 375345 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo01g01862 | 511 | PRINTS | E-class P450 group I signature | 67 | 86 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g01862 | 511 | PRINTS | E-class P450 group I signature | 91 | 112 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g01862 | 511 | PRINTS | E-class P450 group I signature | 186 | 204 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g01862 | 511 | PRINTS | E-class P450 group I signature | 300 | 317 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g01862 | 511 | PRINTS | E-class P450 group I signature | 320 | 346 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g01862 | 511 | PRINTS | E-class P450 group I signature | 363 | 381 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g01862 | 511 | PRINTS | E-class P450 group I signature | 404 | 428 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g01862 | 511 | PRINTS | E-class P450 group I signature | 437 | 447 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g01862 | 511 | PRINTS | E-class P450 group I signature | 447 | 470 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g01862 | 511 | SUPERFAMILY | Cytochrome P450 | 40 | 501 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g01862 | 511 | Gene3D | Cytochrome P450 | 26 | 499 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g01862 | 511 | Pfam | Cytochrome P450 | 40 | 490 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g01862 | 511 | PRINTS | P450 superfamily signature | 311 | 328 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g01862 | 511 | PRINTS | P450 superfamily signature | 364 | 375 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g01862 | 511 | PRINTS | P450 superfamily signature | 438 | 447 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g01862 | 511 | PRINTS | P450 superfamily signature | 447 | 458 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo01g01862 | 511 | PANTHER | CYTOCHROME P450 FAMILY PROTEIN | 18 | 504 | - | - | |
Cmo01g01862 | 511 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 18 | 504 | - | - | |
Cmo01g01862 | 511 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 440 | 449 | IPR017972 | GO:0005506|GO:0016705 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g01862 | Cmo-Chr1:13529829 | Cmo09g00263 | Cmo-Chr9:1165145 | 2.16E-19 | dispersed | |
Cmo09g00264 | Cmo-Chr9:1168565 | Cmo01g01862 | Cmo-Chr1:13529829 | 5.08E-114 | dispersed | |
Cmo01g01862 | Cmo-Chr1:13529829 | Cmo05g00157 | Cmo-Chr5:679848 | 8.77E-23 | wgd | |
Cmo01g01862 | Cmo-Chr1:13529829 | Cmo09g00261 | Cmo-Chr9:1159525 | 1.44E-64 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo01g01862 | - | K13260 | csv:101207242 | 776.933 |