Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01910 ATGTGCACAAGGGGTGAACATCATACGGTCTCGCTCTCCGTGCTCCTGAAGCGTGAATTGGCGATTGAGAAGATTGAGAGACCGGAAATCGTACATGGTCAAGCGTGTCAGAGTAAGAAAGGGGAGGATTTTACGTTGATAAAGACGGAATGCGAGAGAGTGGTTGGAGATGGAGTCTCTACGTATTCGGTTTTTGGGCTTTTTGATGGACATAATGGATCTGCTGCTGCTATTTATGCGAAGGAAAATCTGTTGAACAATGTTTTAGCTGCTATTCCACCAGATCTCAACAGAGATGAATGGATTGCAGCATTACCAAGGGCCTTGGTCGCAGGTTTTGTGAAGACGGACAAAGATTTTCAAGAGAAAGCACGAACATCAGGAACCACTGTCACCTTCATGATCATTGAGGGATGGGTTATCACTGTTGCTTCTGTTGGAGATTCCCGTTGCACTTTAGAATCAGCTGAAGGTGCCATCTACTACTTATCAGCAGATCATAGACTAGAATGCAATGAAGAAGAGAGAGAACGTATAATTGCTAGTGGAGGTGAGGTAGGCCGACTGAATACTGGTGGTGGTGCAGAGATCGGTCCATTGAGATGCTGGCCCGGTGGCTTGTGTCTATCACGATCCATTGGTGATATGGATGTTGGTGAGTTTATAGTGCCTGTTCCCTATGTGAAGCAAGTTAAGCTATCTTCTACTGGTGGTAGGGTTATCATATCAAGTGATGGTGTTTGGGATGAATTATCCGCAGAAACTGCCTATGATTGTAGTCGGGGGATGCCAGCAGAAACTGCTGCTGCACAGATTGTGAAGGAAGCAGTACATTCAAAGGGACTTCGAGATGATACTACGTGCATTGTGATTGACATATATCCAAGGGAGAAGTCATCCACTGTTTTGCAGCCACTAAAGAAGCAGGGAAAAGGAATGTTTAAGTCAATGTTCCGCAAAAGATCTTCTGAATCATCTTCTCATTTGGGGAAGGAAAATAATGAGTTGGATGTCGTTGAAGAATTATTTGAGGAAGGATCGGCAATGCTCTCAGAAAGGTTAGATGCCAAGTATCCTATCTGCAACATGTTTAAGCTGTTTGTATGTGCAGTATGCCAAGTTGAGATCCAACCTCGGGAGGGTATTTCCATATATGCTGACTCATCTAACAGAGGAAAATTGCGTGCTTGGGATGGTCCTTTTCTATGCTTAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAGAGACCATCTGGAGATAGACACAGCAGTGGAAGTGACTAG 1287 44.44 MCTRGEHHTVSLSVLLKRELAIEKIERPEIVHGQACQSKKGEDFTLIKTECERVVGDGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLAAIPPDLNRDEWIAALPRALVAGFVKTDKDFQEKARTSGTTVTFMIIEGWVITVASVGDSRCTLESAEGAIYYLSADHRLECNEEERERIIASGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSSTGGRVIISSDGVWDELSAETAYDCSRGMPAETAAAQIVKEAVHSKGLRDDTTCIVIDIYPREKSSTVLQPLKKQGKGMFKSMFRKRSSESSSHLGKENNELDVVEELFEEGSAMLSERLDAKYPICNMFKLFVCAVCQVEIQPREGISIYADSSNRGKLRAWDGPFLCLSCQEKKEAMEGKRPSGDRHSSGSD 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13709304 13714155 - CmoCh01G019100.1 Cmo01g01910 375393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01910 428 CDD PP2Cc 39 293 IPR001932 -
Cmo01g01910 428 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 2 423 - -
Cmo01g01910 428 SUPERFAMILY PP2C-like 38 293 IPR036457 -
Cmo01g01910 428 Pfam Protein phosphatase 2C 57 277 IPR001932 -
Cmo01g01910 428 Gene3D - 31 302 IPR036457 -
Cmo01g01910 428 ProSiteProfiles PPM-type phosphatase domain profile. 24 293 IPR001932 -
Cmo01g01910 428 PANTHER ALPHABET, ISOFORM E-RELATED 2 423 - -
Cmo01g01910 428 SMART PP2C_4 23 291 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01910 Cmo09g00211 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01910 Cmo-Chr1:13709304 Cmo04g01566 Cmo-Chr4:8006180 1.38E-169 dispersed
Cmo01g01910 Cmo-Chr1:13709304 Cmo09g00211 Cmo-Chr9:983713 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01910 - - bhj:120085570 762.296