Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01931 ATGGCGGTCGCGACTGATCCGCTCGGCTGCATGCAAAAACTCGTCCAGATGCTTCAGGCTCCGCCGTATGTCGCGGCCGCCGTTCTGGGTGGTGTGTTGCTTCTGACGATTTTCATCGGAGATTGGAGAAAGAGACGTCGGAGTCCTCTACCTCCGGTGCCGGCGATTCCGGGGATACCGGTGCTGGGGAATCTGTTGCAGTTGAAGGAGAAGAAGCCGCACAAAACGTTTGCTCAATGGTCCGAGACGTATGGTCCGATTTATTCCATAAAAGCCGGCGCCTCCACTGTGATCGTTCTCAACTCCTCCGATCTCGCCAAAGAGGCTATGGTGACGAGGTACTCTTCCATTTCCAGTAGAAAACTAAGCAAAGCCCTCACTATCTTGACTGCTGATAAATGCATGGTTGCTATGAGCGATTACAATGACTTTCATAAGCTGGTTAAGAGATACATATTGGCTAATGTCTTGGGGGCTAACGCTCAGAAAAGACTCAGACAAAGGAGAGACACCATGATAGACAATATTTCCAGAGAATTGTTGGCTCGTGTGAAGGATTCTTCATCAGAATCTGTTAATTTCCGAAAGATCTTTGAATCGGAACTCTTCGGGCTGGCGCTTAAAGAAACGTTTGGGAGGGATATGGAGTCGTTATATGTCGATGGGCTTGGTACGACGTTGCGGAGAGAAGATCTGTTCAGAACTTTAGTGATTGATCCAATGGAGGGTGCGATTGAGGTTGATTGGAGAGATTTCTTCCCATATCTGAGATGGATTCCCAACAAGGGTGTGGAGGATAGGATCACGAAGATGGACTTTCGCAGGGGAGTGACGATGAAGAGCCTCGTGGAGGAGAAGAAGAAGCGAATTGCAGCTGGGGAGGATTTGAATTGCTATTCTGAGTTCTTGTTATCTGAAGCAAAATCACTCACAGAGGAACAGATATCCATGTTGCTCTGGGAGATAATCATTGAAACCTCAGACACTACTCTGGTTGTAACTGAATGGGCTATGTATGAACTTGCTCAAAATCCTAAACGACAGGAGCGTCTATATCAGCATATACAAAGTGTGTGTGGATCTGCAAAGATTACTGAAGAAAACCTGTCACAGCTCCCATATTTGACTGCCGTTTTTCACGAAACTCTTCGGAAGTACAGTCCAGTCTCGATCGTTCCATTGCGATATGCGCATGAAGATACCCAGTTAGGCGGGTACTTCATTCCTGCAGGGAGTGAGGTTGCTGTGAACATTTACGCCTGCAACATGGACAAGAAACAATGGGAAAGCCCTGAGGAATGGAAGCCAGAGAGGTTTCTTGATGAGAGCTATGATCCAATGGACCTGTACAAAACCATGGCGTTCGGAGGCGGGAAGAGGGTGTGTGCAGGTGCCCCCAAGGCAATGCTGATTGCTTGCACTACCCTTGGAAGACTGGTTCAAGAGTTCACTTGGAAGCTGAGGGAAGGAGAAGAAGACAAGGTCGACACTTTCGGCCTCACTGCTCGCAAGCTCCAACCACTGCACATCGTCGCCAAACCGAGAATCAACTAA 1554 48.2 MAVATDPLGCMQKLVQMLQAPPYVAAAVLGGVLLLTIFIGDWRKRRRSPLPPVPAIPGIPVLGNLLQLKEKKPHKTFAQWSETYGPIYSIKAGASTVIVLNSSDLAKEAMVTRYSSISSRKLSKALTILTADKCMVAMSDYNDFHKLVKRYILANVLGANAQKRLRQRRDTMIDNISRELLARVKDSSSESVNFRKIFESELFGLALKETFGRDMESLYVDGLGTTLRREDLFRTLVIDPMEGAIEVDWRDFFPYLRWIPNKGVEDRITKMDFRRGVTMKSLVEEKKKRIAAGEDLNCYSEFLLSEAKSLTEEQISMLLWEIIIETSDTTLVVTEWAMYELAQNPKRQERLYQHIQSVCGSAKITEENLSQLPYLTAVFHETLRKYSPVSIVPLRYAHEDTQLGGYFIPAGSEVAVNIYACNMDKKQWESPEEWKPERFLDESYDPMDLYKTMAFGGGKRVCAGAPKAMLIACTTLGRLVQEFTWKLREGEEDKVDTFGLTARKLQPLHIVAKPRIN 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13796137 13798534 - CmoCh01G019310.1 Cmo01g01931 375414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01931 517 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 26 515 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Cmo01g01931 517 SUPERFAMILY Cytochrome P450 51 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01931 517 Pfam Cytochrome P450 57 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01931 517 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01931 517 PRINTS E-class P450 group I signature 105 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01931 517 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01931 517 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01931 517 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01931 517 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01931 517 Gene3D Cytochrome P450 38 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01931 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01931 Cmo09g00195 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01931 Cmo-Chr1:13796137 Cmo14g00506 Cmo-Chr14:2503246 6.15E-61 dispersed
Cmo01g01931 Cmo-Chr1:13796137 Cmo09g00195 Cmo-Chr9:875646 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01931 K04122 - csv:101209283 827.78