Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g01939 ATGGAACTTCCCCACATATCCTCAACTACCATTGCTCTGCCTGCAATCTTTGCCCTTCTCTTCTTTCTTTATGCTCTCTTCACTATATTTTCTGCTCACCGCAAGAGACTACCGCCCCAACCCCGCGGTGCTTGGCCGGTCATCGGCCACCTCCCTTTACTAAGCGGAAAAGAACCACATCACACCGCGTTGGGAAAATTGGCGGACGTTTATGGACCAATCTTCATGTTAAGATTAGGCGCCCACCGAACCTTGATTGTGAGTGGCTGGGAAGTGGCAAGGGAGTGCTTAACTGTCAACGACAAAGCATTTGCCTCCCGCCCCAAGTTTGCCGCCGCACAGCTACTTGGCTATGATTATGCCATGTTTGCGCTAAGCCCATACGGATCACACTGGAGCCATTTGCGTAAGATAGCCACGCTTGAACTCCTCGCCAACCATCGACTCGAGAAGCTTCAACACATCCCAAGATCAGAGGTTCAAATCTCGATCGAGAAATTACATCAGTTTTGCAAATCAAATAATGGAGGTAATAAAGCGTTGATGGAGATGGAGACGTGGTTTGGGGAAATGGCGCTGAATACTATATTCAGGATGGTGGTCGGAAAACGATTCACCACTGCTTTTGAAGGTAGCGGCGGAGCAGAGTATCGGCACGCGTTGGAGGATTTTTTTAATTTGTTTACGGCGTTTGTTCCGTCGGATTTGTTTGCATTTCTGAAATGGTTCGACTTTGGAGGTCATAAGAAGGCCATGAAGAAGACGGCAAAGGTGCTGGACAAGATGCTTGATAAATGGCTGGCAGAGCATCGTGAGAGGAGAAATTCCGGTGAAGTGACGCCGGAAGAGCAGGATTTCATGCACGTTATGTTGTCTTTTATAGACAATGAAGAATTTCCCGGCTACGATGCCGACACGGTCATCAAATCCACCTGTTTGGCTATGATATTGGGGGGATTTCACACCAACACAACCGACATGATTTGGGCTCTTTCCTTACTCCTCAATCGTGACGAAGCATACGAGAAGCTTCAAAAGGAATTAGACGAACATGTTGGGAGAGACAGGGCAGTGAGTGAATCGGATGTGAAAAATTTGATATATCTCCAAGCTGTTGTGAAGGAAACATTGCGTATGTATCCTGCAGGACCGCTGTCGGTCCCTCGCGAATCTATAGAAGATTGTACTGTTGCTGGGTATCACATCCCTGCAAAGACACGACTTTGGGTGAATCTTTATAAGCTTCAAAGAGATCCAAATGTTTGGGAGAATCCTAACGAATTTTATCCGGAGAGGTTCTTGACAACTCAAAAGAATTTTGATGTTAAAGGACGAAATCCCCAACTGATACCATTTGGTGGTGGTCGAAGAATTTGCCCTGGGGCGACTTTTTCCCTCCAACTTTTGCACTTGTCGCTTGCGAGGCTTCTTCATGAGTTTGAAATTGGACGACCATCCGAAGAGCGACTCGATATGGAAGAAATTGCTGCATTGAACGTCACTAAGAAAATCCCTCTTCAAGTTGTCTTAGCTCCGCGTCTTTCTACTAAGGTTCATGAATGA 1563 46.51 MELPHISSTTIALPAIFALLFFLYALFTIFSAHRKRLPPQPRGAWPVIGHLPLLSGKEPHHTALGKLADVYGPIFMLRLGAHRTLIVSGWEVARECLTVNDKAFASRPKFAAAQLLGYDYAMFALSPYGSHWSHLRKIATLELLANHRLEKLQHIPRSEVQISIEKLHQFCKSNNGGNKALMEMETWFGEMALNTIFRMVVGKRFTTAFEGSGGAEYRHALEDFFNLFTAFVPSDLFAFLKWFDFGGHKKAMKKTAKVLDKMLDKWLAEHRERRNSGEVTPEEQDFMHVMLSFIDNEEFPGYDADTVIKSTCLAMILGGFHTNTTDMIWALSLLLNRDEAYEKLQKELDEHVGRDRAVSESDVKNLIYLQAVVKETLRMYPAGPLSVPRESIEDCTVAGYHIPAKTRLWVNLYKLQRDPNVWENPNEFYPERFLTTQKNFDVKGRNPQLIPFGGGRRICPGATFSLQLLHLSLARLLHEFEIGRPSEERLDMEEIAALNVTKKIPLQVVLAPRLSTKVHE 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13828458 13830099 + CmoCh01G019390.1 Cmo01g01939 375422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g01939 520 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01939 520 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01939 520 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01939 520 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01939 520 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01939 520 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01939 520 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01939 520 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01939 520 Pfam Cytochrome P450 38 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01939 520 Gene3D Cytochrome P450 30 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01939 520 PANTHER CYTOCHROME P450 35 518 - -
Cmo01g01939 520 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01939 520 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01939 520 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01939 520 SUPERFAMILY Cytochrome P450 38 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo01g01939 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Cmo01g01939 520 PANTHER CYTOCHROME P450 82C3-RELATED 35 518 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01939 Cmo09g00185 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01939 Cmo-Chr1:13828458 Cmo01g01941 Cmo-Chr1:13838099 0 dispersed
Cmo01g01938 Cmo-Chr1:13822365 Cmo01g01939 Cmo-Chr1:13828458 0 tandem
Cmo01g01939 Cmo-Chr1:13828458 Cmo01g01940 Cmo-Chr1:13832605 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g01939 - - csv:101208091 738.413