Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo01g02020 | ATGACGGCTGGACTCGGAAAATGCAGCAAAATCCGACACATTGTCAGGCTCCGACAAATGCTCCGACGGTGGCGCAACAAGGCACGAATATCCGCCAATCGTATCCCCTCGGACGTACCTGCCGGACACGTGGCCGTTTGCGTTGGAACGAGCTGTCGACGGTTCGTCGTCCGGGCAACCTACTTGAACCACCCGGTTTTCAAGAAGCTTTTAGTCGAAGCAGAAGAGGAATACGGGTTTAGCAATTCAGGTCCCTTGGCAATCCCTTGCGACGAATCGGTTTTCGAAGAAGTGATCCGGTTCATCTCTAGATCCGAACCACCCAACTCGGGGCGGTTCGTGAAATTGGACGATTATCAGAGTTACTGCCATATCGGAATCAGAAACAGAGTCGATTTCTGGCCGGAATCTCGGCCTTTGCTTCATGGGTTGGCCGAGAAATCCATCTGGTAA | 453 | 52.54 | MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDYQSYCHIGIRNRVDFWPESRPLLHGLAEKSIW | 150 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 14202814 | 14203266 | + | CmoCh01G020200.1 | Cmo01g02020 | 375503 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo01g02020 | 150 | Pfam | Auxin responsive protein | 16 | 101 | IPR003676 | GO:0009733 | |
Cmo01g02020 | 150 | PANTHER | SMALL AUXIN-UP RNA-RELATED | 6 | 143 | - | - | |
Cmo01g02020 | 150 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 6 | 143 | IPR003676 | GO:0009733 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g02020 | Cmo-Chr1:14202814 | Cmo19g00716 | Cmo-Chr19:7493864 | 1.23E-64 | dispersed | |
Cmo01g02020 | Cmo-Chr1:14202814 | Cmo01g02022 | Cmo-Chr1:14218591 | 1.35E-19 | proximal | |
Cmo01g02020 | Cmo-Chr1:14202814 | Cmo20g00808 | Cmo-Chr20:3991241 | 2.35E-50 | wgd | |
Cmo01g02020 | Cmo-Chr1:14202814 | Cmo09g00112 | Cmo-Chr9:530087 | 1.23E-102 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo01g02020 | K14488 | - | csv:101216342 | 289.271 |