Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g02061 ATGGCGGAACACGGCGGCGAAATAGATCCAAGAAGCGGGTTCTGCAAATCCACCAAAATCTTCCACAGCAAGCGCCACCCAATCCCTCTCCCCCCAAACCAATCCCTCGATGCGACGACCTTCATCTCTTCCCGCCCTCACAACGGCAAAATCGCCCTCATCGACGCCACCACCGGCCAACACATAACCTATTCCCACCTCTGGGAATCCGTCGATTCCGTCGCCTCTGCTCTCTCCGACATGGGAATCCGAAAAGGCCACGTCATCCTCCTCCTCTCCCCTAACTCCATTTTCTTCCCCATCATTTGCCTCGCCGTCATGTCCATCGGCGCCATCATCACCACCACAAATCCCCTCAATACTCCCCAAGAAATCGCCAAGCAGATCGCCGATTCAAAACCCATTTTAGCTTTCACAACCCAACAATTACTCCCCAAAATCGCCAGCTCCAAATTGCCAATCGTCCTTATTGACGGCGAAATTCAAACCCCCTCAGTCAAAATCGTGTCCACGTTGAACGAAATGATGAGGAAAAAACCCAGTGAGAGTAGAATCAAAGAACGGGTTGAGCAAAACGACACAGCGACTCTGCTTTATTCGTCTGGAACGACAGGGGCGAGCAAGGGCGTAGTGTCGTCTCATAAAAATTTAATTGCGATGGTCCAAGTGGTCGTGACGAGGTTCAGATTAAGCGAAGGGGAAGGGACTTTTATCTGTACGGTTCCGATGTTTCATATCTATGGACTCGTGGCCTTCGCGACGGGGCTGCTGTCTTCAGGATCCACGATCATCGTGTTGTCCAAATTCGAAATTCATGAGATGTTGTCTGCGATTGATAAGTACAGGGCAACGTATCTGCCACTTGTGCCCCCGATTCTAGTGGCGCTAGTGAACGCCGCCGAGCAGATAAAGGGCAAGTACGATTTGAGCTCCTTGCACACGGCGTTGTCCGGCGGAGCGCCGCTGGGGAAGGAGGTCATTGAGGGTTTTGTTGAGAAATATCCGAATGTTGCGATTCTTCAGGGGTATGGGTTGACGGAGTCCACCGGAATAGGAGCTTCCACTGATTCTCTGGAGGAGAGCCGCCGGTATGGCACGGCGGGGCTTTTGTCTCCGAGCACTGAGGCAATGATTGTTGACCCGGAAACTGGCAAGCCTCTGCCCGTGAACCGGACCGGAGAGCTTTGGCTCAGAGGACCCACCGTTATGAAAGAATATCGTGTTTCTTTTCAAAAAAATAATTCAGGATCATATGGGTATTTTGGTAATGTGGAGGCCACAGCCTCAACGCTCGACTCAAAGGGATGGTTGAGAACGGGCGATCTGTGTTACATCGATCAAGATGGTTTTATTTTTGTGGTTGATAGGCTCAAAGAACTCATCAAATACAAGGGTTATCAGGTGCCTCCAGCCGAATTAGAGGCGTTATTACTCACACATCCTAATATCTCTGATGCAGCTGTGATCCCTTTTCCAGACAAGGAGGTTGGGCAGTATCCAATGGCCTACGTGGTAGGAAAGGGTGGAAGTGACATTTCACATGAAGATGTAATGCAATTCGCGGCAAAACAGGTCAAAATAAAATTTCTATTATTTAAAAAATGGTTAATTATTATTATTATTTTATCTGGTCAACTCTATAATCATAAGCTGAGAAGGGGTCCACGTGTGCTTGTACAGGTGGCGCCGTACAAGAGAATCCGGCGGGTGGCTTTTGTGGATTCCATTCCCAAAAATCCGTCCGGTAAGATTTTGAGAAAGGATCTCATAAAGCTTGCAACCTCTAGACTCTGA 1794 49.05 MAEHGGEIDPRSGFCKSTKIFHSKRHPIPLPPNQSLDATTFISSRPHNGKIALIDATTGQHITYSHLWESVDSVASALSDMGIRKGHVILLLSPNSIFFPIICLAVMSIGAIITTTNPLNTPQEIAKQIADSKPILAFTTQQLLPKIASSKLPIVLIDGEIQTPSVKIVSTLNEMMRKKPSESRIKERVEQNDTATLLYSSGTTGASKGVVSSHKNLIAMVQVVVTRFRLSEGEGTFICTVPMFHIYGLVAFATGLLSSGSTIIVLSKFEIHEMLSAIDKYRATYLPLVPPILVALVNAAEQIKGKYDLSSLHTALSGGAPLGKEVIEGFVEKYPNVAILQGYGLTESTGIGASTDSLEESRRYGTAGLLSPSTEAMIVDPETGKPLPVNRTGELWLRGPTVMKEYRVSFQKNNSGSYGYFGNVEATASTLDSKGWLRTGDLCYIDQDGFIFVVDRLKELIKYKGYQVPPAELEALLLTHPNISDAAVIPFPDKEVGQYPMAYVVGKGGSDISHEDVMQFAAKQVKIKFLLFKKWLIIIIILSGQLYNHKLRRGPRVLVQVAPYKRIRRVAFVDSIPKNPSGKILRKDLIKLATSRL 597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14389013 14392370 - CmoCh01G020610.1 Cmo01g02061 375544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g02061 597 CDD 4CL 30 589 - -
Cmo01g02061 597 Gene3D - 459 596 IPR045851 -
Cmo01g02061 597 Gene3D - 18 458 IPR042099 -
Cmo01g02061 597 Pfam AMP-binding enzyme 47 463 IPR000873 -
Cmo01g02061 597 PANTHER 4-COUMARATE--COA LIGASE-LIKE 3-RELATED 559 596 - -
Cmo01g02061 597 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 526 - -
Cmo01g02061 597 SUPERFAMILY Acetyl-CoA synthetase-like 42 595 - -
Cmo01g02061 597 Pfam AMP-binding enzyme C-terminal domain 472 583 IPR025110 -
Cmo01g02061 597 ProSitePatterns Putative AMP-binding domain signature. 197 208 IPR020845 -
Cmo01g02061 597 PANTHER 4-COUMARATE--COA LIGASE-LIKE 3-RELATED 9 526 - -
Cmo01g02061 597 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 559 596 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g02061 Cmo09g00069 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g02061 Cmo-Chr1:14389013 Cmo18g00200 Cmo-Chr18:1339080 3.04E-157 dispersed
Cmo01g02061 Cmo-Chr1:14389013 Cmo09g00069 Cmo-Chr9:306661 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g02061 K10526 - csv:101221396 950.273