Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g02069 ATGGCTGGATCGGATGAGAACAACCCGGATGTGACCGGACGAGCAAATCTCCATGGGAGTTTACGAGTTGATGGCGGTGGCAAATTTGTAGTGGGGGCGGGTCAAAACCGCAGAGCTTTGAGCAACATTAATGGCAATGTTAGAGCTGCTCCTCCTCCCCTTCATCCCTGTGCAGTCCTCAAAAGAGGCTTAACAGAAACTGATGCTGTTCTCAACTGTAAAGTTCCTCCCATTCCGATCCATCGACCGATTACTCGGAAGTTTGCAGCTCAGCTGGCCGACAAGCAGCAGCAACCTCTGCCTGAGGTTGATAGAAAGCCATTACAATCTGCTCCAACTCGAAAAGACTCAATAGATCATCACCCCATCACAGAGGAAGATGATTCTATGGACGAATCGGCAGTACCGATGTTCGTTCAACATACAAAAGCAATGTTGGATGAAATTGACAAAATGGAAGAGGTGGAAATGGAAGATATAGAAGAAGAGCCAGTCATGGACATAGACAGCTGCGATAAGAAGAACCAGCTAGCTGTTGTGGAATACATTGATGACTTGTATGCTTGCTACAGGAGAGCCGAGGTTTCTGGCTGTGTCCCACCAAACTACATGGCTCACCAAGCAGATATTAACGAGAGGATGAGAGGGATTCTTATTGACTGGCTAATTGAGGTTCACTACAAGTTTGAGCTGATGGAGGAGACATTGTACCTCACAGTCAACCTGATCGATAGATTCTTGGCGGTTCAATCGGTGGTGAGGAAGAAGCTCCAGCTTGTTGGAGTGACGGCGATGCTTATTGCCTGCAAGTACGAGGAGGTTTCTGTTCCTGTTGTGGATGATCTTATTCTCATATCTGACAAGGCCTACAGCCGAAAGGAAATTTTGGACATGGAAAAGTTGATGGTAAACACCTTACAGTTCAATCTGTCTGTTCCAACACTTTATGTGTTCATGAGAAGGTTTCTCAAAGCTGCCCAATCTGATAGAGAGCTGGAGCTGCTGTCATTCTTCATGGTGGAGCTCTGTCTTGTGGAATATGAAATGCTCAAGTATAAACCTTCATTAATGGCTGCTGCTGCGGTCTTCACTGCTCAGTGCACCATCAATGGCTTCAAGGAATGGAGCAAAACCAGTGAGTGGCACACTGGGTATTCTCAGGAGCAGCTTATGGAATGTTCACGTTTGATGGTGGAGTTTCATGAGAAAGCAGGGACAGGAAAATTGACAGGAGTTCACAGGAAGTACAGCACATCCAAGTTTGGATATGCTGCAAGAAGTGAACCAGCAAGCTTTCTGTTGGAAGAAGAAAGGTCATAG 1320 46.21 MAGSDENNPDVTGRANLHGSLRVDGGGKFVVGAGQNRRALSNINGNVRAAPPPLHPCAVLKRGLTETDAVLNCKVPPIPIHRPITRKFAAQLADKQQQPLPEVDRKPLQSAPTRKDSIDHHPITEEDDSMDESAVPMFVQHTKAMLDEIDKMEEVEMEDIEEEPVMDIDSCDKKNQLAVVEYIDDLYACYRRAEVSGCVPPNYMAHQADINERMRGILIDWLIEVHYKFELMEETLYLTVNLIDRFLAVQSVVRKKLQLVGVTAMLIACKYEEVSVPVVDDLILISDKAYSRKEILDMEKLMVNTLQFNLSVPTLYVFMRRFLKAAQSDRELELLSFFMVELCLVEYEMLKYKPSLMAAAAVFTAQCTINGFKEWSKTSEWHTGYSQEQLMECSRLMVEFHEKAGTGKLTGVHRKYSTSKFGYAARSEPASFLLEEERS 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14424211 14426828 - CmoCh01G020690.1 Cmo01g02069 375552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g02069 439 Gene3D - 185 424 - -
Cmo01g02069 439 MobiDBLite consensus disorder prediction 92 130 - -
Cmo01g02069 439 SUPERFAMILY Cyclin-like 174 310 IPR036915 -
Cmo01g02069 439 SMART Cyclin_C_2 313 430 IPR004367 -
Cmo01g02069 439 PANTHER CYCLIN-B2-3-RELATED 25 431 - -
Cmo01g02069 439 SUPERFAMILY Cyclin-like 312 430 IPR036915 -
Cmo01g02069 439 Pfam Cyclin, N-terminal domain 186 311 IPR006671 -
Cmo01g02069 439 Gene3D - 199 311 - -
Cmo01g02069 439 MobiDBLite consensus disorder prediction 1 24 - -
Cmo01g02069 439 ProSitePatterns Cyclins signature. 215 246 IPR006671 -
Cmo01g02069 439 SMART cyclin_7 317 399 IPR013763 -
Cmo01g02069 439 SMART cyclin_7 220 304 IPR013763 -
Cmo01g02069 439 CDD CYCLIN 311 398 IPR013763 -
Cmo01g02069 439 Pfam Cyclin, C-terminal domain 313 427 IPR004367 -
Cmo01g02069 439 MobiDBLite consensus disorder prediction 108 128 - -
Cmo01g02069 439 CDD CYCLIN 214 303 IPR013763 -
Cmo01g02069 439 PANTHER CYCLINS 25 431 IPR039361 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g02069 Cmo-Chr1:14424211 Cmo03g00655 Cmo-Chr3:5920759 1.35E-162 dispersed
Cmo13g01211 Cmo-Chr13:9525952 Cmo01g02069 Cmo-Chr1:14424211 3.30E-07 dispersed
Cmo01g02069 Cmo-Chr1:14424211 Cmo07g00380 Cmo-Chr7:1754220 1.54E-168 wgd
Cmo01g02069 Cmo-Chr1:14424211 Cmo09g00056 Cmo-Chr9:258209 2.79E-58 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g02069 K21777 - csv:101223199 745.347