Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo01g02074 | ATGAGCTGCTTTTCTTGCATTCGCACTCGTTGTAATGACGCCAGCAAGGTCGAAATTGACAATGAAACTGGAAAAGGGAAGGAATCACAACCCAGAAGTGGAAACAACCGGAAATGTGGGGCTGCTCGAAGCTTCCCGTTTCGCGAATTGGCAACGGCGACCAGAGGTTTCAAGGAAGTGAACTTGATTGGTGAAGGCGGGTTTGGAAGAGTTTACAAAGGCCGATTAGAGTCAGGCCAGGTTGTTGCTATTAAGCAACTCAATCACGACGGTCTTCAAGGATTTCAGGAATTTATCGTCGAAGTTCTCATGTTAAGCCTATTGCATCACTGTAATCTTGTTACGTTGATCGGTTACTGTACCGATGGAGACCAAAGGCTGTTGGTATACGAGTACATGTCGATGGGAAGCTTGGAAAACCATCTTTTCGGTTTGTCCCCCGAACGACCGCCATTGAGTTGGAACACTCGAATCAAAATTGCTCTTGGTGCAGCCCGGGGCCTTGAGTATCTTCACTGCACAGCCAATCCACCGGTTATCTACCGTGACTTGAAATCTGCAAATATCTTACTGGATGACGAGTTCAATCCAAAGCTCTCGGATTTCGGACTGGCCAAGTTAGGACCGGTCGGTGACAACACCCATGTTTCTACCAGAGTGATGGGAACATATGGTTATTGTGCTCCGGAGTATGCCATGAGCGGCAAACTTACTCTGAAATCTGATATCTATTGCTTTGGTGTGGTTCTCTTGGAGATAATTACAGGTAGGAAAGCAATAGACACCACCAAGAAACCTGGAGAGCAAAACCTGGTTGCTTGGTCTCGCCCGTTTATTAAAGACCGGAGGAAGTTTGTTCACTTAGTCGACCCACTACTAGAAGGATGCTACCCTGTTCGTTGTCTACACCACGCGATCGCAATTGCTGCAATGTGTCTCCAGGAGCAGCCAACATTCAGACCAATTATCAGTGATATCGTCGTGGCTCTTGAATACTTAGCTTCTCAAAGTTGCGCATCAGAACAACCGAGAGACGGGGCGGCGCCTAATCCCTCCAAACTATCCCCTCAACAAGACAGGAGTCATGGAAAGAGCTCTACATCCAAGTAA | 1110 | 47.3 | MSCFSCIRTRCNDASKVEIDNETGKGKESQPRSGNNRKCGAARSFPFRELATATRGFKEVNLIGEGGFGRVYKGRLESGQVVAIKQLNHDGLQGFQEFIVEVLMLSLLHHCNLVTLIGYCTDGDQRLLVYEYMSMGSLENHLFGLSPERPPLSWNTRIKIALGAARGLEYLHCTANPPVIYRDLKSANILLDDEFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYCFGVVLLEIITGRKAIDTTKKPGEQNLVAWSRPFIKDRRKFVHLVDPLLEGCYPVRCLHHAIAIAAMCLQEQPTFRPIISDIVVALEYLASQSCASEQPRDGAAPNPSKLSPQQDRSHGKSSTSK | 369 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 14456723 | 14459125 | - | CmoCh01G020740.1 | Cmo01g02074 | 375557 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo01g02074 | 369 | MobiDBLite | consensus disorder prediction | 341 | 369 | - | - | |
Cmo01g02074 | 369 | Pfam | Protein kinase domain | 57 | 326 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo01g02074 | 369 | ProSitePatterns | Protein kinases ATP-binding region signature. | 63 | 85 | IPR017441 | GO:0005524 | |
Cmo01g02074 | 369 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 179 | 191 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo01g02074 | 369 | PIRSF | ILK | 11 | 346 | - | - | |
Cmo01g02074 | 369 | PANTHER | OS07G0668900 PROTEIN | 25 | 362 | - | - | |
Cmo01g02074 | 369 | MobiDBLite | consensus disorder prediction | 351 | 369 | - | - | |
Cmo01g02074 | 369 | CDD | STKc_IRAK | 63 | 331 | - | - | |
Cmo01g02074 | 369 | Gene3D | Phosphorylase Kinase; domain 1 | 28 | 132 | - | - | |
Cmo01g02074 | 369 | SUPERFAMILY | Protein kinase-like (PK-like) | 38 | 331 | IPR011009 | - | |
Cmo01g02074 | 369 | MobiDBLite | consensus disorder prediction | 20 | 40 | - | - | |
Cmo01g02074 | 369 | SMART | serkin_6 | 57 | 333 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo01g02074 | 369 | PANTHER | OS07G0668900 PROTEIN | 25 | 362 | - | - | |
Cmo01g02074 | 369 | ProSiteProfiles | Protein kinase domain profile. | 57 | 333 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo01g02074 | 369 | Gene3D | Transferase(Phosphotransferase) domain 1 | 133 | 348 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo01g02074 | Cmo05g00994 | CCT | |
Cmo01g02074 | Cmo05g00994 | ECH | |
Cmo01g02074 | Cmo09g00054 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g02074 | Cmo-Chr1:14456723 | Cmo09g00054 | Cmo-Chr9:219005 | 0 | dispersed | |
Cmo01g02074 | Cmo-Chr1:14456723 | Cmo12g00618 | Cmo-Chr12:3855597 | 2.13E-132 | wgd | |
Cmo01g02074 | Cmo-Chr1:14456723 | Cmo05g00994 | Cmo-Chr5:8007821 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74075 | PF00069 | Pkinase | 3.80E-44 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo01g02074 | - | - | csv:101203407 | 680.248 |