Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g02074 ATGAGCTGCTTTTCTTGCATTCGCACTCGTTGTAATGACGCCAGCAAGGTCGAAATTGACAATGAAACTGGAAAAGGGAAGGAATCACAACCCAGAAGTGGAAACAACCGGAAATGTGGGGCTGCTCGAAGCTTCCCGTTTCGCGAATTGGCAACGGCGACCAGAGGTTTCAAGGAAGTGAACTTGATTGGTGAAGGCGGGTTTGGAAGAGTTTACAAAGGCCGATTAGAGTCAGGCCAGGTTGTTGCTATTAAGCAACTCAATCACGACGGTCTTCAAGGATTTCAGGAATTTATCGTCGAAGTTCTCATGTTAAGCCTATTGCATCACTGTAATCTTGTTACGTTGATCGGTTACTGTACCGATGGAGACCAAAGGCTGTTGGTATACGAGTACATGTCGATGGGAAGCTTGGAAAACCATCTTTTCGGTTTGTCCCCCGAACGACCGCCATTGAGTTGGAACACTCGAATCAAAATTGCTCTTGGTGCAGCCCGGGGCCTTGAGTATCTTCACTGCACAGCCAATCCACCGGTTATCTACCGTGACTTGAAATCTGCAAATATCTTACTGGATGACGAGTTCAATCCAAAGCTCTCGGATTTCGGACTGGCCAAGTTAGGACCGGTCGGTGACAACACCCATGTTTCTACCAGAGTGATGGGAACATATGGTTATTGTGCTCCGGAGTATGCCATGAGCGGCAAACTTACTCTGAAATCTGATATCTATTGCTTTGGTGTGGTTCTCTTGGAGATAATTACAGGTAGGAAAGCAATAGACACCACCAAGAAACCTGGAGAGCAAAACCTGGTTGCTTGGTCTCGCCCGTTTATTAAAGACCGGAGGAAGTTTGTTCACTTAGTCGACCCACTACTAGAAGGATGCTACCCTGTTCGTTGTCTACACCACGCGATCGCAATTGCTGCAATGTGTCTCCAGGAGCAGCCAACATTCAGACCAATTATCAGTGATATCGTCGTGGCTCTTGAATACTTAGCTTCTCAAAGTTGCGCATCAGAACAACCGAGAGACGGGGCGGCGCCTAATCCCTCCAAACTATCCCCTCAACAAGACAGGAGTCATGGAAAGAGCTCTACATCCAAGTAA 1110 47.3 MSCFSCIRTRCNDASKVEIDNETGKGKESQPRSGNNRKCGAARSFPFRELATATRGFKEVNLIGEGGFGRVYKGRLESGQVVAIKQLNHDGLQGFQEFIVEVLMLSLLHHCNLVTLIGYCTDGDQRLLVYEYMSMGSLENHLFGLSPERPPLSWNTRIKIALGAARGLEYLHCTANPPVIYRDLKSANILLDDEFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYCFGVVLLEIITGRKAIDTTKKPGEQNLVAWSRPFIKDRRKFVHLVDPLLEGCYPVRCLHHAIAIAAMCLQEQPTFRPIISDIVVALEYLASQSCASEQPRDGAAPNPSKLSPQQDRSHGKSSTSK 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14456723 14459125 - CmoCh01G020740.1 Cmo01g02074 375557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g02074 369 MobiDBLite consensus disorder prediction 341 369 - -
Cmo01g02074 369 Pfam Protein kinase domain 57 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo01g02074 369 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Cmo01g02074 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Cmo01g02074 369 PIRSF ILK 11 346 - -
Cmo01g02074 369 PANTHER OS07G0668900 PROTEIN 25 362 - -
Cmo01g02074 369 MobiDBLite consensus disorder prediction 351 369 - -
Cmo01g02074 369 CDD STKc_IRAK 63 331 - -
Cmo01g02074 369 Gene3D Phosphorylase Kinase; domain 1 28 132 - -
Cmo01g02074 369 SUPERFAMILY Protein kinase-like (PK-like) 38 331 IPR011009 -
Cmo01g02074 369 MobiDBLite consensus disorder prediction 20 40 - -
Cmo01g02074 369 SMART serkin_6 57 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo01g02074 369 PANTHER OS07G0668900 PROTEIN 25 362 - -
Cmo01g02074 369 ProSiteProfiles Protein kinase domain profile. 57 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo01g02074 369 Gene3D Transferase(Phosphotransferase) domain 1 133 348 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g02074 Cmo05g00994 CCT
Cmo01g02074 Cmo05g00994 ECH
Cmo01g02074 Cmo09g00054 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g02074 Cmo-Chr1:14456723 Cmo09g00054 Cmo-Chr9:219005 0 dispersed
Cmo01g02074 Cmo-Chr1:14456723 Cmo12g00618 Cmo-Chr12:3855597 2.13E-132 wgd
Cmo01g02074 Cmo-Chr1:14456723 Cmo05g00994 Cmo-Chr5:8007821 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74075 PF00069 Pkinase 3.80E-44 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g02074 - - csv:101203407 680.248