Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo01g02082 ATGGCTACGGGTATAGATTTTTCACCTCCCTTTGCCCTACTAGAAGGCGGCGGGTACAGTAAGGACAATGTATCAGCGACAAATGACGAAAGTTCTGATAGCTTTAATAGTTTGAAACAGATGACCACTGGGAAACCTCCCCGACACCTCTCGGTTTCGCGGCATAGTGTGAGCTCTATAAAGCTGCTAGACCAAGCTGATTTAAGCTTGGATGCTGATACTCTTGGGAACAATTCGCCTGATGGGAAAGCAGGATTCTTACCTGTCTTCAGATCGGGTAGCTGTTCAGAAAGGGGACCTAAGCAGTACATGGAAGATGAGCACATATGCATAGATGATCTTGTAGAACACATTCATGCATGTGCAGATTTCACTTCTCCTGGAGCTTTCTATGGTGTATTTGATGGCCATGGGGGTACAGATGCAGCAGCTTTTGTCAGAAATAACATCCTTAGATTCATAGTCGAGGACTCCTGTTTTCCAGTTAGTGTAGATAAGGCAATTAAGAGTGCTTTTTTGAAAGCTGATTATGCATTTGCTGATGCTAGTTCTCTGGATATCTCCTCCGGCACAACTGCGCTAACTGCTTTCATTTTTGGAAGTGCCCCCTTAGAGGTCAAGTTTCTTGGACTAAGATTTGTTGTTCAAACACTGAATGCTCATCTGTCCAAAACAATGATTATTGGGAATGCCGGAGATTGTCGAGCAGTTCTGGGGAGGAGGGGCAAGGCTATTGAGGTGTCAAAGGATCACAAGCCCAATTGTGCATCTGAAAAACTCAGAATAGAGAAGCTCGGGGGAGTGATTTATGATGGCTACCTGAATGGTCAGTTATCTGTTGCGCGTGCTATAGGAGACTGGCACATGAAAGGTGCTAAGGGTTCTGCATGCCCGCTGAGTGCAGAGCCAGAGCTGCAGGAATTGCAATTGACGGAGGAAGATGAATTTCTAATTATGGGCTGCGATGGTCTTTGGGATGTGATGAGCAGTCAGTATGCTGTTACAATGGCAAGGAAAGAGCTGATGCTGCATAATGATCCTGAAAGATGTTCAAGAGAGCTGGTAAGAGAGGCGCTGAAGCGCAATACATGCGATAATCTAACCGTTATTGTAGTCTGTTTTTCTGCTGATCCGCCCCCTCGGATAGAAATTCCCCAAACTCGAGTAAGGAGAAGCATATCATTAGAAGGGCTGAATTTGTTGAAAGGTGTACTGGACTGCAATTCATGA 1230 45.2 MATGIDFSPPFALLEGGGYSKDNVSATNDESSDSFNSLKQMTTGKPPRHLSVSRHSVSSIKLLDQADLSLDADTLGNNSPDGKAGFLPVFRSGSCSERGPKQYMEDEHICIDDLVEHIHACADFTSPGAFYGVFDGHGGTDAAAFVRNNILRFIVEDSCFPVSVDKAIKSAFLKADYAFADASSLDISSGTTALTAFIFGSAPLEVKFLGLRFVVQTLNAHLSKTMIIGNAGDCRAVLGRRGKAIEVSKDHKPNCASEKLRIEKLGGVIYDGYLNGQLSVARAIGDWHMKGAKGSACPLSAEPELQELQLTEEDEFLIMGCDGLWDVMSSQYAVTMARKELMLHNDPERCSRELVREALKRNTCDNLTVIVVCFSADPPPRIEIPQTRVRRSISLEGLNLLKGVLDCNS 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14485174 14488759 - CmoCh01G020820.1 Cmo01g02082 375565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo01g02082 409 ProSiteProfiles PPM-type phosphatase domain profile. 91 374 IPR001932 -
Cmo01g02082 409 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 201 - -
Cmo01g02082 409 SUPERFAMILY PP2C-like 85 375 IPR036457 -
Cmo01g02082 409 PANTHER PROTEIN PHOSPHATASE 2C 223 396 IPR015655 GO:0004722|GO:0006470
Cmo01g02082 409 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 223 396 - -
Cmo01g02082 409 CDD PP2Cc 90 374 IPR001932 -
Cmo01g02082 409 PANTHER PROTEIN PHOSPHATASE 2C 1 201 IPR015655 GO:0004722|GO:0006470
Cmo01g02082 409 MobiDBLite consensus disorder prediction 21 51 - -
Cmo01g02082 409 MobiDBLite consensus disorder prediction 18 51 - -
Cmo01g02082 409 Gene3D - 88 388 IPR036457 -
Cmo01g02082 409 Pfam Protein phosphatase 2C 92 366 IPR001932 -
Cmo01g02082 409 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169
Cmo01g02082 409 SMART PP2C_4 81 372 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g02082 Cmo09g00041 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g02082 Cmo-Chr1:14485174 Cmo05g01271 Cmo-Chr5:9862224 7.50E-108 dispersed
Cmo01g02082 Cmo-Chr1:14485174 Cmo09g00041 Cmo-Chr9:173255 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo01g02082 K14803 - csv:101205355 708.368