Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00036 ATGGCAGCAGCTTCATCAATGGCTTTGTCCTCCCCATCTCTCGCCGGCCAAGCCGTGAAATTATCCCCCGCCGCTGCCTCCAACCTCCTCGGCGAGAGCCGTGTCACCATGAGGAAAACCGCTGGCAGGCCCAAGCCCGTCTCCTCCGGTAGCCCATGGTACGGCCCTGATCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCCCCTTCCTATCTCACCGGCGAGTTCCCCGGCGACTACGGCTGGGACACTGCTGGCCTCTCTGCTGACCCAGAGACCTTCGCCAAAAACCGTGAGCTGGAAGTGATCCACTCGAGGTGGGCCATGCTTGGAGCTCTTGGCTGCGTCTTCCCGGAGCTTCTGTCTCGCAACGGCGTGAAATTCGGCGAGGCCGTGTGGTTCAAAGCCGGGTCTCAGATCTTCAGCGAGGGTGGGCTCGACTATTTGGGGAACCCGAGCTTGGTTCACGCGCAGAGCATTCTGGCGATCTGGGCTTGCCAGGTTGTGCTGATGGGAGCCGTGGAGGGGTACAGAATTGCAGGTGGGCCGCTGGGTGAGATCACGGACCCAATTTACCCAGGGGGCAGCTTCGACCCATTGGGGCTCGCTGACGACCCAGAGGCCTTCGCGGAGCTCAAAGTGAAGGAGCTGAAGAATGGAAGATTGGCAATGTTTTCGATGTTTGGATTCTTTGTGCAGGCAATTGTGACAGGGAAAGGACCTTTGGAGAACTTGGCTGACCATTTGGCCGACCCTGTTAACAACAACGCTTGGGCTTTTGCCACTAACTTTGTACCTGGAAAGTGA 810 58.52 MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 207147 207956 + CmoCh02G000360.1 Cmo02g00036 375633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00036 269 Pfam Chlorophyll A-B binding protein 69 235 IPR022796 -
Cmo02g00036 269 Gene3D Chlorophyll a/b binding protein domain 60 262 - -
Cmo02g00036 269 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 3 269 - -
Cmo02g00036 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 269 IPR001344 GO:0009765|GO:0016020
Cmo02g00036 269 SUPERFAMILY Chlorophyll a-b binding protein 52 266 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00036 Cmo20g00287 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00036 Cmo-Chr2:207147 Cmo07g00130 Cmo-Chr7:703094 0 dispersed
Cmo02g00036 Cmo-Chr2:207147 Cmo20g00287 Cmo-Chr20:1389168 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00036 K08912 - csv:101213845 528.094