Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00063 ATGAAATTTGAAGAGCAGAGCTTGAAGCAACAGTCGGAACAGATATGCAAGACTGTTGAGGTCGACGTAATTGATCACCATCGCACTGCATCGTCGCTGGTCGAATTGGAAGCTTCTGAAGATTGCGAGAGGGATGGACCGGATGGTGACGGCCTCTATATTCCTCCCCTCAACTTTTCCATGGTTGATAATGGCATTTTCCGCTCCGACTTCCCTAATTCTGCTAACTTCTCCTTCCTCCAAACCCTAGGCCTCCGTTCCATTATATGTCTATGTCCGGAGCCGTATCCGGAACACAACATGGAGTTTCTCAAGTCTAACGGAATCAGATTGTATCAATTTGGAATCGAGAGCTATAAGATGTACAGCGTTTACATTACAGCACGTAGTTTAAGTTATATGGAATTTCACCAGGGAACGCATGGCGCAATTCGTTATGGATGGCTGATTTATGGTAATGTTGCATCAGCCTGCGAGCCTTTTGTGAATATCCCAGATGATATGATTCGTGAAGCACTGAAAGTTGTCCTTGGTACTACTGAATATCATCTTAAAAACGATAGAAATCATCCAATCCTCATACATTGCAAGAGAGGAAAGGTAGTCACTGTTTTTCCCCCTATGCTTCCACATCCCATGAATCCAAGTTCACTACTCTCTTTACCTAGAAACCCTTCTCTCTGTCCAGCATCGTACAGGTTGCCTTGTGGGATGCCTGAGAAAATTGCAGAGGTGGTGCCTCACTTCTGTAGATTTGCAGCTGCAAAAGCAAGAATTTCAGACCAGAGGTTTATGGAATTGTTCGATATCTCCGACTTGAGGCATCTTCCCATGTCATTCGCATGCTCAAAGAGAGTAATGACGAATGTTTACATTTGTACACTTCCAGGTTTGATGCCAATGATCACGGGCAATCATTGCATAGTTGGTAGTGTTGATGAGTTGTATTCTACCTTTGCCAATTTATAA 969 43.55 MKFEEQSLKQQSEQICKTVEVDVIDHHRTASSLVELEASEDCERDGPDGDGLYIPPLNFSMVDNGIFRSDFPNSANFSFLQTLGLRSIICLCPEPYPEHNMEFLKSNGIRLYQFGIESYKMYSVYITARSLSYMEFHQGTHGAIRYGWLIYGNVASACEPFVNIPDDMIREALKVVLGTTEYHLKNDRNHPILIHCKRGKVVTVFPPMLPHPMNPSSLLSLPRNPSLCPASYRLPCGMPEKIAEVVPHFCRFAAAKARISDQRFMELFDISDLRHLPMSFACSKRVMTNVYICTLPGLMPMITGNHCIVGSVDELYSTFANL 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 325814 329823 + CmoCh02G000630.1 Cmo02g00063 375660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00063 322 Gene3D Protein tyrosine phosphatase superfamily 53 205 IPR029021 -
Cmo02g00063 322 PANTHER TYROSINE-PROTEIN PHOSPHATASE 15 203 - -
Cmo02g00063 322 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 54 200 IPR029021 -
Cmo02g00063 322 PANTHER TYROSINE-PROTEIN PHOSPHATASE 244 285 - -
Cmo02g00063 322 PRINTS Plant and fungal dual specificity phosphatase signature 109 123 IPR020428 GO:0016791
Cmo02g00063 322 PRINTS Plant and fungal dual specificity phosphatase signature 53 70 IPR020428 GO:0016791
Cmo02g00063 322 PRINTS Plant and fungal dual specificity phosphatase signature 90 103 IPR020428 GO:0016791
Cmo02g00063 322 PANTHER - 244 285 - -
Cmo02g00063 322 Pfam Tyrosine phosphatase family 53 203 IPR004861 -
Cmo02g00063 322 PANTHER - 15 203 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00063 Cmo20g00254 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00063 Cmo-Chr2:325814 Cmo11g00963 Cmo-Chr11:5063323 1.52E-41 dispersed
Cmo11g02016 Cmo-Chr11:13756868 Cmo02g00063 Cmo-Chr2:325814 9.86E-65 wgd
Cmo19g01077 Cmo-Chr19:9285905 Cmo02g00063 Cmo-Chr2:325814 9.08E-61 wgd
Cmo02g00063 Cmo-Chr2:325814 Cmo20g00254 Cmo-Chr20:1227643 1.75E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00063 K18045 - csv:101222170 274.248