Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00082 ATGGAGGATCAGCGAGATGATGTTGCACAATCAGAGCAAGGGCCTTCCAATGCTACCTGGTGGTCTTCTGATTTCGTGGAGAAATTTGGATCTGTTTCTTTGGGCCCTCGGGAAGATACTGTAAGTGAAAAGGAAGAGCTCATCAATTCTGACCAAGATGCGTTGTTGTCGCCTCAAAGAGCATCTCAAATTCTCTGGCGTACTGGAATGCTTTGTGAACCAATTCCAGATGGTTTCTATTCTGTTATTCCGGACAAAAGGCTAAAAGAGCAGTTTCACAATATTCCTTCGCTGGATGAGCTTCGTGCTTTGGAGGCCGAAGGTTACAAAAACGATGTTATTCTTGTGGAGACGGAGAAAGATAAAAAGCTTTCTATGCTGAAGCAACTGATCTTGACACTGGTTAAAGGATTGAGTTCAAATCCAGCCGCAATTATCAAGAAGATCGCAGGACTGGTTTCTGACTTTTATAAACGACCAATTTTAGAAAGTCCAGCAAAAGCCGCTGTAGAAGAAACCTCCCACTTGTTTGACGATAGAGGCATTCAATTACTTGGACAAATAAAATTTGGTTCATGCCGTCCAAGAGCCATCTTATTTAAGTCTCTGGCAGACACAGTAGGGCTCGAAAGCCGTCTCATGGTGGGCTTGCCAAATGAGGGGGCTATTGGGTGCGTGGACTCATACAAGCATATGTCTGTGACAGTTGTGTTGAATTCTGTGGAACTAGTCGTTGATCTTATGCGATTTCCTGGCCAGTTGTTACCTCGGTCAACTAAGGCAATTTTTATGACTCATATTTCTGCTGCTGGGGAAAGTGATTCTGCAGAAAACGACTCCTGTGATTCACCTCTGGAACCTAATAGTCCTCTTTATGGGTTCTCAGAGAGAGTTGATCCCGACAGTGTTGAAAAAGATGAGAGCCTTCAATTCCACAGAAAATTTGATGCAGCTTCTAATGCATATGGTCCTAAATTGCGCAACTGGATGTTGCGTTCAAGTACAACACTTGACAGCAAACTGAGTTTATCACATAGTGAACCTAACATTGCAAATGCATTTTGGCGACGTAGTCGGAGAAAGGATATTGCTGAACAGCGGACTGCTAGTTCAAGTCCAGAGCATCCTTCATTTCGGGCGCGTGGCCGGTCCATGCTTAGTGGGGATAGGAAAGTCTTCAGAGATTTTTCTGATGATGTCTCTACTTCAAGATCAGATGGCGCTTCAACTTCAGAAGCACGTCGAATAAGAAGAAGGAGCATCAGCATTACTCCAGAGATTGGTGATGATATCGTGAGGACTGTGCGAGCAATGAATGAAACAATGAAGCAAAATCGTCTTTTGAGAGGACAAACAGATGACAGGTCGTTCTCCCACCCTTCAAATGAACGAAATAGTAGTTCAGATGTTCGGAGAAATGATCCATTGGGTTCTCAAAGAGCAATATCATTACCAACATCGCCACATGAGTATAGGGGTCAAACCTCTGATAGAAGTGAACATTCGGCATTTGCGAATGATGATTTAGCCTCAAAATGGACTAAAGTTCTTGAATCTTTCTCCATGAACGACAAACCACTATTACCTTACCCAGAATGGAACATTGATTACTCAGAACTCACAGTTGGAATCCGTATTGGAATTGGGTTTTTTGGAGAAGTTTTTCGTGGCATTTGGAATGGAACAGATGTGGCGATCAAAGTTTTCCTAGAGCAAGATCTAACTCCTGAAAACATTGAAGACTTCTGTAATGAGATATTAATTCTTAGTCGTCTTCGACATCCTAATGTTTTATTGTTTCTGGGTGCATGCACAAAGCCGCCACGATTGTCAATGGTCAGTGAATACATGGAAATGGGCTCCTTGTATTCCTTGATCCATTTGAGTGGTCAGAAAAAAAAACTAAGCTGGCGGAGAAGACTAAAGATGTTACGTGACATATGCAGGGGTTTGATGTGCATACATCGAATGAAAATAGCTCATCGGGACCTAAAAAGTGCAAATTGCCTAGTGAACAAGCATTGGACTGTCAAGATATGTGATTTTGGACTTTCAAGAGTATTGACTGAGGCTCCAGCAAGAGGGTCTCCATCTGCAGGAACTCCAGAATGGATGGCTCCCGAGCTCTTCCGAAACGAACCCTTCACTGAAAAGTGTGATATTTTCAGCCTGGGGGTCATTATGTGGGAGCTATGCACGCTAAGTAGACCGTGGGAGGGTGTTCCACAAGAGCGGGTAGTTTATGCTGTTGGCACCGAGGGAGCACGCCTAGAGATTCCTGAAGGACCCCTTGGCAGACTTATATCAGATTGTTGGGCAGAACCAAATGAACGGCCAAGCTGCGAAGAGATTCTCTCACGCTTGCTCGACTGCGAGTACTCGCTTTCTTGA 2391 43.87 MEDQRDDVAQSEQGPSNATWWSSDFVEKFGSVSLGPREDTVSEKEELINSDQDALLSPQRASQILWRTGMLCEPIPDGFYSVIPDKRLKEQFHNIPSLDELRALEAEGYKNDVILVETEKDKKLSMLKQLILTLVKGLSSNPAAIIKKIAGLVSDFYKRPILESPAKAAVEETSHLFDDRGIQLLGQIKFGSCRPRAILFKSLADTVGLESRLMVGLPNEGAIGCVDSYKHMSVTVVLNSVELVVDLMRFPGQLLPRSTKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGFSERVDPDSVEKDESLQFHRKFDAASNAYGPKLRNWMLRSSTTLDSKLSLSHSEPNIANAFWRRSRRKDIAEQRTASSSPEHPSFRARGRSMLSGDRKVFRDFSDDVSTSRSDGASTSEARRIRRRSISITPEIGDDIVRTVRAMNETMKQNRLLRGQTDDRSFSHPSNERNSSSDVRRNDPLGSQRAISLPTSPHEYRGQTSDRSEHSAFANDDLASKWTKVLESFSMNDKPLLPYPEWNIDYSELTVGIRIGIGFFGEVFRGIWNGTDVAIKVFLEQDLTPENIEDFCNEILILSRLRHPNVLLFLGACTKPPRLSMVSEYMEMGSLYSLIHLSGQKKKLSWRRRLKMLRDICRGLMCIHRMKIAHRDLKSANCLVNKHWTVKICDFGLSRVLTEAPARGSPSAGTPEWMAPELFRNEPFTEKCDIFSLGVIMWELCTLSRPWEGVPQERVVYAVGTEGARLEIPEGPLGRLISDCWAEPNERPSCEEILSRLLDCEYSLS 796
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 423661 431438 - CmoCh02G000820.1 Cmo02g00082 375679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00082 796 Pfam Ethylene-responsive protein kinase Le-CTR1 59 254 - -
Cmo02g00082 796 ProSitePatterns Protein kinases ATP-binding region signature. 546 567 IPR017441 GO:0005524
Cmo02g00082 796 MobiDBLite consensus disorder prediction 471 492 - -
Cmo02g00082 796 SMART serkin_6 540 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g00082 796 MobiDBLite consensus disorder prediction 442 502 - -
Cmo02g00082 796 Gene3D Transferase(Phosphotransferase) domain 1 619 795 - -
Cmo02g00082 796 MobiDBLite consensus disorder prediction 398 417 - -
Cmo02g00082 796 SUPERFAMILY Protein kinase-like (PK-like) 517 788 IPR011009 -
Cmo02g00082 796 Pfam Protein tyrosine and serine/threonine kinase 541 788 IPR001245 GO:0004672|GO:0006468
Cmo02g00082 796 MobiDBLite consensus disorder prediction 447 470 - -
Cmo02g00082 796 MobiDBLite consensus disorder prediction 362 384 - -
Cmo02g00082 796 Gene3D Phosphorylase Kinase; domain 1 533 618 - -
Cmo02g00082 796 CDD STKc_MAP3K-like 546 788 - -
Cmo02g00082 796 ProSiteProfiles Protein kinase domain profile. 540 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g00082 796 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 30 794 - -
Cmo02g00082 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 659 671 IPR008271 GO:0004672|GO:0006468
Cmo02g00082 796 PANTHER MITOGEN ACTIVATED PROTEIN KINASE KINASE KINASE-LIKE PROTEIN-RELATED 30 794 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00082 Cmo20g00235 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00082 Cmo-Chr2:423661 Cmo01g01773 Cmo-Chr1:13120602 3.89E-75 dispersed
Cmo02g00082 Cmo-Chr2:423661 Cmo20g00235 Cmo-Chr20:1141319 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74081 PF07714 PK_Tyr_Ser-Thr 6.20E-58 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00082 - - csv:101220859 1466.44