Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g00117 | ATGGGGATCTGTTTGTCTACTGGCAATCAGTGTAGCTGCAATGGGGGAGCCAATGGAGAGAGGATTTCTGGATCCTGTTTGGGGATTAGAGTTTCTGGCCGGATTGAAAGAAAAAGAACATTTTCAGATCATACCTTTTCTATTCAGCATTTGAATTCTATACCGAATAGGCTTGTTTATAATGGGAAGACTCGAAATTCTTGCATTTTCACTCAGCAGGGTCGCAAGGGGATAAATCAGGATGCCATGGTTGTGTGGGAAGACTTCATATCAGATGGTGCAATTTTTTGTGGGGTATTTGATGGTCACGGCCCTCATGGTCATGTCGTTGCACGAAAGGTTAGAGATGTTCTTCCAAGAAAGCTGGAGTCATCCTGGGAGTCATCTCAGTTAAAGCATAACAGATCAGATAGAACTTCTTGTTTCCGGTGGAGTCAGAAGAATTCAGCAGATGGTGAACGACACGACATGGATGGCTCGCAGGAGGATAAATCAAGTTCTTTATGGAGAAAAGCTTTTCTCAAATCATATAAAGCCATGGATAAGGAGCTCAAATCTCATCCCAAAGTGGACTGTTTCTGCAGTGGTTGTACTGCGGTCACTCTGGTTAAGCAGGGTTCCGATCTATTCGTGGGAAGTATCGGGGATTCTCGAGCAATTCTCGGATCGAAAGATAGCAGTGATTCGCCTGTAGCAACCCAATTGACAGTAGATCTAAAGCCTGATTTACCCAGAGAAGCTGAAAGGATAAAGAAGTGTAAAGGAAGGGTGTTTGCATTGCAAGATGAGCCAGAAGTGCCAAGAGTGTGGCTGCCATTTGACAATGCACCTGGCTTAGCCATGGCTCGAGCGTTTGGCGACTTCTGTTTGAAGGACTATGGAGTTATCTCTATTCCCGAATTTTCGCACCGTGTACTTACAGATAACGATCTGTTTGTTGTCCTTGCTTCAGATGGGGTTTGGGACGTATTGAGCAACCAAGAGGTGGTTGAGATAGTTCATTCTGCCCCAACTCGCTCATCGGCAGCTCGGATGGTGGTAGACTCGGCTGCTCGTGAATGGAAGCTCAAGTACCCTACTTCAAAAATGGACGACTGTGCAGTCGTTTGCTTATTCTTGGACGGGAAAATGGATTCAAATTCAGAAAATGAAGAACAATCTCTTGCAACTCTTCAAACCGATGAAATGTATCACACGGAAAATTCAGATGAAGAGCAGAGGTTGGAGCCAAGTTTACAGAGGAACGATACGGTCCGATCATCGGAAGAAAAAGAGCAAATCGGAGGGCGATGTTCACAAAGCAAAGAGAATGGAGAATCAATCTGTGCTAAAGATGAGAATTGGTTAGGATTGGAGGGTGTAACAAGAGTAAACTCCCTGATTCAACTTCCTAGATTTTCTTGTACTAAGAACATAGTTGAAGAAGGTTTCTTCACACTGTCACCGCATGACAAAGGCAGCTCTGGAGAAGGGCAGGCAGGCTCATATGGCACAAACCCAGCTCCAAGACGTCAATATATCCCCGGTGGAGATGATAATTTCATTCCAAATCCTGGATTTGAGGTACCAATCCCAGCCAAGATTAGTGGTGTAAAAGAAACACCCTACCCTTGA | 1614 | 44.67 | MGICLSTGNQCSCNGGANGERISGSCLGIRVSGRIERKRTFSDHTFSIQHLNSIPNRLVYNGKTRNSCIFTQQGRKGINQDAMVVWEDFISDGAIFCGVFDGHGPHGHVVARKVRDVLPRKLESSWESSQLKHNRSDRTSCFRWSQKNSADGERHDMDGSQEDKSSSLWRKAFLKSYKAMDKELKSHPKVDCFCSGCTAVTLVKQGSDLFVGSIGDSRAILGSKDSSDSPVATQLTVDLKPDLPREAERIKKCKGRVFALQDEPEVPRVWLPFDNAPGLAMARAFGDFCLKDYGVISIPEFSHRVLTDNDLFVVLASDGVWDVLSNQEVVEIVHSAPTRSSAARMVVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSNSENEEQSLATLQTDEMYHTENSDEEQRLEPSLQRNDTVRSSEEKEQIGGRCSQSKENGESICAKDENWLGLEGVTRVNSLIQLPRFSCTKNIVEEGFFTLSPHDKGSSGEGQAGSYGTNPAPRRQYIPGGDDNFIPNPGFEVPIPAKISGVKETPYP | 537 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 615738 | 623612 | + | CmoCh02G001170.1 | Cmo02g00117 | 375714 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g00117 | 537 | MobiDBLite | consensus disorder prediction | 482 | 520 | - | - | |
Cmo02g00117 | 537 | CDD | PP2Cc | 72 | 373 | IPR001932 | - | |
Cmo02g00117 | 537 | MobiDBLite | consensus disorder prediction | 398 | 436 | - | - | |
Cmo02g00117 | 537 | Pfam | Protein phosphatase 2C | 152 | 350 | IPR001932 | - | |
Cmo02g00117 | 537 | ProSiteProfiles | PPM-type phosphatase domain profile. | 66 | 373 | IPR001932 | - | |
Cmo02g00117 | 537 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 461 | - | - | |
Cmo02g00117 | 537 | Gene3D | - | 56 | 375 | IPR036457 | - | |
Cmo02g00117 | 537 | SUPERFAMILY | PP2C-like | 60 | 375 | IPR036457 | - | |
Cmo02g00117 | 537 | MobiDBLite | consensus disorder prediction | 485 | 499 | - | - | |
Cmo02g00117 | 537 | MobiDBLite | consensus disorder prediction | 398 | 430 | - | - | |
Cmo02g00117 | 537 | MobiDBLite | consensus disorder prediction | 142 | 163 | - | - | |
Cmo02g00117 | 537 | SMART | PP2C_4 | 55 | 371 | IPR001932 | - | |
Cmo02g00117 | 537 | MobiDBLite | consensus disorder prediction | 148 | 163 | - | - | |
Cmo02g00117 | 537 | PANTHER | PROTEIN PHOSPHATASE 2C 52-RELATED | 1 | 461 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo02g00117 | Cmo11g01944 | CCT | |
Cmo02g00117 | Cmo19g01011 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00117 | Cmo-Chr2:615738 | Cmo05g00859 | Cmo-Chr5:5570993 | 1.08E-146 | dispersed | |
Cmo11g01944 | Cmo-Chr11:13426857 | Cmo02g00117 | Cmo-Chr2:615738 | 0 | wgd | |
Cmo19g01011 | Cmo-Chr19:8942372 | Cmo02g00117 | Cmo-Chr2:615738 | 0 | wgd | |
Cmo02g00117 | Cmo-Chr2:615738 | Cmo20g00582 | Cmo-Chr20:2863747 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g00117 | - | - | cmax:111469610 | 942.954 |