Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g00128 | ATGGCATGGAATTCCTTCTACAACAGAGCCTCTAAGGCTTATCACGACCATCCCAACATCTCCAAGCTCCTCCTCGTCTTGGCCGCCAGTGGAGGTGGGCTGGTGGCAAGTACTAATGGCAAATCTCTGTACCCTTCTGCATTTGCTGATGCCGTCCAACAAGATGATGATTGGAGGAAGAAGAAGAAGAAGAAGGTGGTGGTGCTTGGAACAGGATGGGCCGGCACCAGCTTCTTGAAGAATCTCAAGAGCTCCTCTTATGATGTTCATGTCATATCCCCTCATAATTACTTCGCTTTCACCCCTTTGCTTCCTAGTGTCACTTGTGGCACCGTCGAGGCACGCAGCATTGTCGAACCAATTCGTAGCATCACCAAGAAGAAAGGATTGAGCATTGAATTTAGGGAAGCTGAGTGTTATAAGATAGATGCAGAGAACAAGAAGGTGTTCTGTCGATCAACTCAAGACACGAACTTGGGTGGCAAGGAAGAGTTTTCAGTGGACTACGACTATCTGATAGTAGCCATGGGAGCTAAATCCAACACTTTCAACACACCAGGAGTAGAGGAAAATGCTCATTTCTTGAAGGGAGTGGAAGATGCTCAGCGGATTCGTCAGTCGGTAATCGATTGTTTCGAGCGAGCCAGCCTTCCAAATCTAAGTGAAGAAGAGAAGAAGAGAACCCTTCACTTTGTTATAGTTGGAGGAGGTCCAACAGGAGTGGAATTTGCAGCAGAACTTCATGACTTTGCTGCAGAGGATTTAGCAGAGTTGTATCCTTCATTGAAAGAATACGTGAAAATCACCCTCTTAGAGGCAGGCGATCATATTTTGAACATGTTTGACAAGAGGATTACAGCCTTCGCTGAAGACAAGTTTCAAAGAGATGGGATTAACTTAAAAACTGGTTCAATGGTTGTGAAAGTAACTGATAAGGAAATCTCCACAAAAGAAAGGGCAACCGGTGAGTTTGTGTCTGTTCCTTATGGAATGGTTGTCTGGTCCACCGGCATCGGTCCTCGGCCTCAAGTCGTCGACTTCATGAAGCAGATCGGTCAGACTAACAGACGAGCTTTGGCTACTGATGAATGGCTAAGGGTTGAAGGATGTGATGGTGTCTATGCTTTTGGTGATTGTGCCACAATAAACCAAAGAAAAGTCATGGAAGATATTGCTGTGATATTCAGCAAGGCGGACACAGACAATTCAGGAAGTTTAGCCCTGCAAGAGTTTCAAGAAGCAGTAAAGGATATTTGTGAGAGGTACCCTCAAGTAGAGATCTATCTGAAGAAGAATAAGATGAAGAACTTTGCAGCCTTGTTGAAGAAGTCGCAATCGGACACGCAGAAACAGTCGACCGAGCTCGATATCGAAAGCTTTACGTCCTTACTTTCCGAAGTCGATGCTCAGATGAAAAATCTGCCTGCTACTGCTCAAGTTGCTGCTCAACAAGGTGAGTATCTTGCAACCTGCTTCAACAAGATGGAACAATGTGAGAAGTACCCGGAAGGCCCTCTCCGATATAGAGGGACGGGGCGACATCGGTTTCGTCCCTTTAGGTACAAGCATTTTGGGCAGTTTGCTCCTCTTGGTGGAGAACAAACTGCAGCTCAACTACCTGGAGATTGGATCTCAATAGGTCATAGCAGCCAGTGGCTTTGGTACTCCGTGTATACAAGCAAGCTAGTAAGCTGGCGCACGAGGGTTCTGGTCCTATCAGACTGGGGTAGAAGATTCATATTTGGCAGAGATTCAAGCAGAATCTGA | 1767 | 46.01 | MAWNSFYNRASKAYHDHPNISKLLLVLAASGGGLVASTNGKSLYPSAFADAVQQDDDWRKKKKKKVVVLGTGWAGTSFLKNLKSSSYDVHVISPHNYFAFTPLLPSVTCGTVEARSIVEPIRSITKKKGLSIEFREAECYKIDAENKKVFCRSTQDTNLGGKEEFSVDYDYLIVAMGAKSNTFNTPGVEENAHFLKGVEDAQRIRQSVIDCFERASLPNLSEEEKKRTLHFVIVGGGPTGVEFAAELHDFAAEDLAELYPSLKEYVKITLLEAGDHILNMFDKRITAFAEDKFQRDGINLKTGSMVVKVTDKEISTKERATGEFVSVPYGMVVWSTGIGPRPQVVDFMKQIGQTNRRALATDEWLRVEGCDGVYAFGDCATINQRKVMEDIAVIFSKADTDNSGSLALQEFQEAVKDICERYPQVEIYLKKNKMKNFAALLKKSQSDTQKQSTELDIESFTSLLSEVDAQMKNLPATAQVAAQQGEYLATCFNKMEQCEKYPEGPLRYRGTGRHRFRPFRYKHFGQFAPLGGEQTAAQLPGDWISIGHSSQWLWYSVYTSKLVSWRTRVLVLSDWGRRFIFGRDSSRI | 588 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 654874 | 657931 | + | CmoCh02G001280.1 | Cmo02g00128 | 375725 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g00128 | 588 | Pfam | Pyridine nucleotide-disulphide oxidoreductase | 64 | 389 | IPR023753 | GO:0016491 | |
Cmo02g00128 | 588 | SUPERFAMILY | FAD/NAD(P)-binding domain | 63 | 282 | IPR036188 | - | |
Cmo02g00128 | 588 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 386 | 421 | IPR002048 | GO:0005509 | |
Cmo02g00128 | 588 | PRINTS | Pyridine nucleotide disulphide reductase class-II signature | 65 | 87 | - | - | |
Cmo02g00128 | 588 | PRINTS | Pyridine nucleotide disulphide reductase class-II signature | 226 | 250 | - | - | |
Cmo02g00128 | 588 | PRINTS | Pyridine nucleotide disulphide reductase class-II signature | 368 | 386 | - | - | |
Cmo02g00128 | 588 | PANTHER | NADH DEHYDROGENASE | 4 | 588 | IPR045024 | GO:0003954|GO:0006116 | |
Cmo02g00128 | 588 | SUPERFAMILY | EF-hand | 344 | 465 | IPR011992 | - | |
Cmo02g00128 | 588 | SUPERFAMILY | FAD/NAD(P)-binding domain | 224 | 383 | IPR036188 | - | |
Cmo02g00128 | 588 | ProSitePatterns | EF-hand calcium-binding domain. | 399 | 411 | IPR018247 | - | |
Cmo02g00128 | 588 | Gene3D | - | 461 | 572 | - | - | |
Cmo02g00128 | 588 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 24 | 43 | - | - | |
Cmo02g00128 | 588 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 169 | 187 | - | - | |
Cmo02g00128 | 588 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 230 | 248 | - | - | |
Cmo02g00128 | 588 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 358 | 380 | - | - | |
Cmo02g00128 | 588 | Gene3D | - | 53 | 444 | - | - | |
Cmo02g00128 | 588 | PANTHER | - | 4 | 588 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo02g00128 | Cmo19g00997 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00128 | Cmo-Chr2:654874 | Cmo13g00698 | Cmo-Chr13:7122507 | 0 | dispersed | |
Cmo19g00997 | Cmo-Chr19:8878606 | Cmo02g00128 | Cmo-Chr2:654874 | 0 | wgd | |
Cmo02g00128 | Cmo-Chr2:654874 | Cmo03g00502 | Cmo-Chr3:5290215 | 6.53E-12 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g00128 | K03885 | - | csv:101209855 | 1063.14 |