Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00128 ATGGCATGGAATTCCTTCTACAACAGAGCCTCTAAGGCTTATCACGACCATCCCAACATCTCCAAGCTCCTCCTCGTCTTGGCCGCCAGTGGAGGTGGGCTGGTGGCAAGTACTAATGGCAAATCTCTGTACCCTTCTGCATTTGCTGATGCCGTCCAACAAGATGATGATTGGAGGAAGAAGAAGAAGAAGAAGGTGGTGGTGCTTGGAACAGGATGGGCCGGCACCAGCTTCTTGAAGAATCTCAAGAGCTCCTCTTATGATGTTCATGTCATATCCCCTCATAATTACTTCGCTTTCACCCCTTTGCTTCCTAGTGTCACTTGTGGCACCGTCGAGGCACGCAGCATTGTCGAACCAATTCGTAGCATCACCAAGAAGAAAGGATTGAGCATTGAATTTAGGGAAGCTGAGTGTTATAAGATAGATGCAGAGAACAAGAAGGTGTTCTGTCGATCAACTCAAGACACGAACTTGGGTGGCAAGGAAGAGTTTTCAGTGGACTACGACTATCTGATAGTAGCCATGGGAGCTAAATCCAACACTTTCAACACACCAGGAGTAGAGGAAAATGCTCATTTCTTGAAGGGAGTGGAAGATGCTCAGCGGATTCGTCAGTCGGTAATCGATTGTTTCGAGCGAGCCAGCCTTCCAAATCTAAGTGAAGAAGAGAAGAAGAGAACCCTTCACTTTGTTATAGTTGGAGGAGGTCCAACAGGAGTGGAATTTGCAGCAGAACTTCATGACTTTGCTGCAGAGGATTTAGCAGAGTTGTATCCTTCATTGAAAGAATACGTGAAAATCACCCTCTTAGAGGCAGGCGATCATATTTTGAACATGTTTGACAAGAGGATTACAGCCTTCGCTGAAGACAAGTTTCAAAGAGATGGGATTAACTTAAAAACTGGTTCAATGGTTGTGAAAGTAACTGATAAGGAAATCTCCACAAAAGAAAGGGCAACCGGTGAGTTTGTGTCTGTTCCTTATGGAATGGTTGTCTGGTCCACCGGCATCGGTCCTCGGCCTCAAGTCGTCGACTTCATGAAGCAGATCGGTCAGACTAACAGACGAGCTTTGGCTACTGATGAATGGCTAAGGGTTGAAGGATGTGATGGTGTCTATGCTTTTGGTGATTGTGCCACAATAAACCAAAGAAAAGTCATGGAAGATATTGCTGTGATATTCAGCAAGGCGGACACAGACAATTCAGGAAGTTTAGCCCTGCAAGAGTTTCAAGAAGCAGTAAAGGATATTTGTGAGAGGTACCCTCAAGTAGAGATCTATCTGAAGAAGAATAAGATGAAGAACTTTGCAGCCTTGTTGAAGAAGTCGCAATCGGACACGCAGAAACAGTCGACCGAGCTCGATATCGAAAGCTTTACGTCCTTACTTTCCGAAGTCGATGCTCAGATGAAAAATCTGCCTGCTACTGCTCAAGTTGCTGCTCAACAAGGTGAGTATCTTGCAACCTGCTTCAACAAGATGGAACAATGTGAGAAGTACCCGGAAGGCCCTCTCCGATATAGAGGGACGGGGCGACATCGGTTTCGTCCCTTTAGGTACAAGCATTTTGGGCAGTTTGCTCCTCTTGGTGGAGAACAAACTGCAGCTCAACTACCTGGAGATTGGATCTCAATAGGTCATAGCAGCCAGTGGCTTTGGTACTCCGTGTATACAAGCAAGCTAGTAAGCTGGCGCACGAGGGTTCTGGTCCTATCAGACTGGGGTAGAAGATTCATATTTGGCAGAGATTCAAGCAGAATCTGA 1767 46.01 MAWNSFYNRASKAYHDHPNISKLLLVLAASGGGLVASTNGKSLYPSAFADAVQQDDDWRKKKKKKVVVLGTGWAGTSFLKNLKSSSYDVHVISPHNYFAFTPLLPSVTCGTVEARSIVEPIRSITKKKGLSIEFREAECYKIDAENKKVFCRSTQDTNLGGKEEFSVDYDYLIVAMGAKSNTFNTPGVEENAHFLKGVEDAQRIRQSVIDCFERASLPNLSEEEKKRTLHFVIVGGGPTGVEFAAELHDFAAEDLAELYPSLKEYVKITLLEAGDHILNMFDKRITAFAEDKFQRDGINLKTGSMVVKVTDKEISTKERATGEFVSVPYGMVVWSTGIGPRPQVVDFMKQIGQTNRRALATDEWLRVEGCDGVYAFGDCATINQRKVMEDIAVIFSKADTDNSGSLALQEFQEAVKDICERYPQVEIYLKKNKMKNFAALLKKSQSDTQKQSTELDIESFTSLLSEVDAQMKNLPATAQVAAQQGEYLATCFNKMEQCEKYPEGPLRYRGTGRHRFRPFRYKHFGQFAPLGGEQTAAQLPGDWISIGHSSQWLWYSVYTSKLVSWRTRVLVLSDWGRRFIFGRDSSRI 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 654874 657931 + CmoCh02G001280.1 Cmo02g00128 375725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00128 588 Pfam Pyridine nucleotide-disulphide oxidoreductase 64 389 IPR023753 GO:0016491
Cmo02g00128 588 SUPERFAMILY FAD/NAD(P)-binding domain 63 282 IPR036188 -
Cmo02g00128 588 ProSiteProfiles EF-hand calcium-binding domain profile. 386 421 IPR002048 GO:0005509
Cmo02g00128 588 PRINTS Pyridine nucleotide disulphide reductase class-II signature 65 87 - -
Cmo02g00128 588 PRINTS Pyridine nucleotide disulphide reductase class-II signature 226 250 - -
Cmo02g00128 588 PRINTS Pyridine nucleotide disulphide reductase class-II signature 368 386 - -
Cmo02g00128 588 PANTHER NADH DEHYDROGENASE 4 588 IPR045024 GO:0003954|GO:0006116
Cmo02g00128 588 SUPERFAMILY EF-hand 344 465 IPR011992 -
Cmo02g00128 588 SUPERFAMILY FAD/NAD(P)-binding domain 224 383 IPR036188 -
Cmo02g00128 588 ProSitePatterns EF-hand calcium-binding domain. 399 411 IPR018247 -
Cmo02g00128 588 Gene3D - 461 572 - -
Cmo02g00128 588 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Cmo02g00128 588 PRINTS FAD-dependent pyridine nucleotide reductase signature 169 187 - -
Cmo02g00128 588 PRINTS FAD-dependent pyridine nucleotide reductase signature 230 248 - -
Cmo02g00128 588 PRINTS FAD-dependent pyridine nucleotide reductase signature 358 380 - -
Cmo02g00128 588 Gene3D - 53 444 - -
Cmo02g00128 588 PANTHER - 4 588 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00128 Cmo19g00997 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00128 Cmo-Chr2:654874 Cmo13g00698 Cmo-Chr13:7122507 0 dispersed
Cmo19g00997 Cmo-Chr19:8878606 Cmo02g00128 Cmo-Chr2:654874 0 wgd
Cmo02g00128 Cmo-Chr2:654874 Cmo03g00502 Cmo-Chr3:5290215 6.53E-12 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00128 K03885 - csv:101209855 1063.14