Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00150 ATGAGGGTTCACACAGAAATGGAATTGAGAAGACCTGGTTATGTGGTTGTATTTGTGATCCTCCTCAGCGCATTGGCAATTTCCAGTTCAGAGGCCAGAACGAAGACCGTCGAAATGGTTCTCACCACTGCCGGCGATTGCCATTTCGCCTCCTCGGAATTCGAACCATATATGGAAGAAAATCTGGCGTGCATGAAAGAATTGGGAGAGAGGGAATATGAATATGAAGATGAAGAATTGGTTGCTTGCATCCAGAAAGGGAACATGGATGAAGCTATAAGAATTCTGGATCCTGAGATGAAACATGAATTGTTGAATTGTTTAAGAAGGAGAAGTATGTTTTCTCGTGGATCTGAAGAAGAAGCACGTCCTAACTTAATTGATGGGTTTAGAAGGTCAACTGAGTTCATCTCCGGAGGCTCCAATATTCACATGAGACGTACAATTCTATCATCCCAAGATTCACCACCATCAGGCCCTGCCGCAGCTCCATCCCCTTCATCAGAATCACCAAACAATTCTCCATCATCATCTCCCAGTAATGCTCCAATGTCATCCCCTACTCATGTCCAACCTAAGTCTCCATTGCCGAAATCGAAATCGAAATCGAAGTCGAAGTCGAAATCGAAATCGAAACAGAAATCGAAAGCAGATGACACCGACACTGGTAATTGGGATTCTACGGATTCTACGGATTCTACGGATTCAACAGATTCACCTTCAGCTTCTGCAGGTCGCTCACCAAGTCTTCCACGTGGTTCTCCCAAGCGTCGCCCTACAATTACGGAGGAGGAAGAAGAAAACCTGATGATTATAATTGCTGGCATTGTAGGAACTGGTGTGGCAGTTGTTTTTACTGTTGCCCTGCTTTTGTTCTGCAGTTGTAGTGATGAGGAAAATGAGCCTGATCCAAAGTTTAGGCAAAGGAGTGAGAAGCCTCTTCTTGTATCTATGGGCGAAGTACCAGCAGGTTCTTCACTGAAGTCTTACAGCCATGGAAATTCAGCTACCAAACAGTTCGGTGCTGATAATGCAACGAAACCACCCTCTTTTGCTGGCAACTTGTCGGTGAATCCTGAAAATGTTACCTCAATGGCTGAGGCTCCAAGATTTGACGGTAAACCATCGGCAATGCCGCCTCTAAAACCCCCTCCTGGAAGATCAGAACCTCCGCCACCTCCTCCACCAGCACCAGAACCAGCACCAAAACCAGCACCAGCACAAGCGGCGGCGGCGGCGGCACCGGCAGCACCTCCACCGCCACCAGCAACTGCTCCTAGAGCTCCACCTCCTCCTCCCATGAAAGGTGCTCGACCCCCACCTGCCCCACCGGCGGGAATCCCTGGTAAAGCTCAAGCAGCGCCTTTGGGGTCAAATCAGCGTGGAACCAATGGCTCAAATACGAATTCGGATCCAGGAAGCCACAAGACCAAGTTAAAGCCATTCTTCTGGGATAAGGTTCTTGCCAATCCTGGTCAATCCATGGTCTGGCACGAGATTAGTGATGGATCTTTCCAATTCAACGAGGAGATGATGGAGTCTCTGTTTGGGTACAATCCTGCAGAAAATAACAAAGGCAACCGCAAGAAAGATTTAGCTTCAGATTCTTCCAATCAGTACATTCAAATCATCGACGCTAGGAAAGCTCAAAACCTTTCAATTCTCCTACGTGCATTGAATGTAACAACAGCAGAAGTCGTGGATTGCATTCAAGAAGGCACGCTCTCTAATAAATCAACAAATTATGTACCAGGAAATCCGGATCTTCCAGCGGAGCTTGTGCAGACATTGTTGAAGATGGCGCCAACAACAGAAGAGGAACTGAAACTGAGATTATTCTCAGGCGACCTTTCTCAGATCGGTCCGGCAGAACGGTTCCTCAAAGTGTTGGTGGAAACTCCTTTCGCTTTCAAACGATTAGAGTGTCTTCTCTTCATGATTTCAATGTCGGAAGACGTCGCTACCGTTAAAGAGTCATTCACAACTCTAGAGGTGACGATTCCAAAATTCAGAAAACAAATTCCATCAGTCGCTTGCGACAAACTCAAGAACAGCAGGCTATTTCTCAAGCTATTAGAAGCAGTTCTCAAAACTGGAAATCGAATGAACGACGGAACGTACCGTGGCGGTGCTCAGGCGTTTAAGCTCGACACGCTCTTGAAACTGGCGGATGTTAAAGGAACCGACGGCAAGACTACTTTCTTACATTTCGTCGTAACGGAGATTATTCGTTCGGAGGGCGTGAGAGCAGCCCGCTCTTGCAGAGAAAGCCAGAGTTTGTCCAGCATAGCCTCCGCCGATATTGTTTTGGATGACTTCACTGACGAGTCGACGGAAAATTATCGAAAACTAGGTCTTCAGGTCGTTTCTAGTTTGAGCACGGAGCTCGTGGACGTTAAAAGAGCGGCAGCCATAGATGCGGATGGGTTAACCAAGATGATAGCGAAACTCGGCCAGTCTCTGATGAAATCCAAAGCATTTATAAATGCCGAAATGAAGAATTTAGACGAAGACAGCAAATTCCGCCAATCGATATTGAAATTTTTGGAAGACGCAGAAACGGATATTACGTGGATTGCAGGGGAAGAAAAGAACATAATGGCGATGGTGAAGAGGACGGCAGATTACTTCCATGGAAGTTCCGGAAAGGACGAAGGATTGCGATTGTTTACCGTCGTACGCGATTTCCTGATTATGCTAGACAAGACGTGTAAACAGGTTAAAGATGCAGCTGCAGCTGAAGCTGCAGCAGCGGCGGCAGCGGCAGTGGCAGCAGCGGCAACAAACCATGGGAAGAATTCAAAGAAAGAAACTCAGAAATTGTCGGCTACTTCTAATCAGAGCCCAGAGCTACGGCAACGGCTATTCCCGGCGATTGTAGAACGACGGAAGGGCGAGGATTCAAGTTCTTCGGACGAGGAGGACGGCGACGGCGACGGCGACGGTGAGAGTTCATCTTCATCATCCTAG 2970 47.41 MRVHTEMELRRPGYVVVFVILLSALAISSSEARTKTVEMVLTTAGDCHFASSEFEPYMEENLACMKELGEREYEYEDEELVACIQKGNMDEAIRILDPEMKHELLNCLRRRSMFSRGSEEEARPNLIDGFRRSTEFISGGSNIHMRRTILSSQDSPPSGPAAAPSPSSESPNNSPSSSPSNAPMSSPTHVQPKSPLPKSKSKSKSKSKSKSKQKSKADDTDTGNWDSTDSTDSTDSTDSPSASAGRSPSLPRGSPKRRPTITEEEEENLMIIIAGIVGTGVAVVFTVALLLFCSCSDEENEPDPKFRQRSEKPLLVSMGEVPAGSSLKSYSHGNSATKQFGADNATKPPSFAGNLSVNPENVTSMAEAPRFDGKPSAMPPLKPPPGRSEPPPPPPPAPEPAPKPAPAQAAAAAAPAAPPPPPATAPRAPPPPPMKGARPPPAPPAGIPGKAQAAPLGSNQRGTNGSNTNSDPGSHKTKLKPFFWDKVLANPGQSMVWHEISDGSFQFNEEMMESLFGYNPAENNKGNRKKDLASDSSNQYIQIIDARKAQNLSILLRALNVTTAEVVDCIQEGTLSNKSTNYVPGNPDLPAELVQTLLKMAPTTEEELKLRLFSGDLSQIGPAERFLKVLVETPFAFKRLECLLFMISMSEDVATVKESFTTLEVTIPKFRKQIPSVACDKLKNSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLADVKGTDGKTTFLHFVVTEIIRSEGVRAARSCRESQSLSSIASADIVLDDFTDESTENYRKLGLQVVSSLSTELVDVKRAAAIDADGLTKMIAKLGQSLMKSKAFINAEMKNLDEDSKFRQSILKFLEDAETDITWIAGEEKNIMAMVKRTADYFHGSSGKDEGLRLFTVVRDFLIMLDKTCKQVKDAAAAEAAAAAAAAVAAAATNHGKNSKKETQKLSATSNQSPELRQRLFPAIVERRKGEDSSSSDEEDGDGDGDGESSSSSS 989
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 734161 738250 - CmoCh02G001500.1 Cmo02g00150 375747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00150 989 MobiDBLite consensus disorder prediction 328 363 - -
Cmo02g00150 989 PANTHER FORMIN-RELATED 7 973 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cmo02g00150 989 MobiDBLite consensus disorder prediction 938 952 - -
Cmo02g00150 989 ProSiteProfiles Formin homology-2 (FH2) domain profile. 469 926 IPR015425 -
Cmo02g00150 989 MobiDBLite consensus disorder prediction 413 448 - -
Cmo02g00150 989 MobiDBLite consensus disorder prediction 929 989 - -
Cmo02g00150 989 SUPERFAMILY Formin homology 2 domain (FH2 domain) 391 916 - -
Cmo02g00150 989 Pfam Formin Homology 2 Domain 474 900 IPR015425 -
Cmo02g00150 989 Gene3D Formin, FH2 domain 488 941 IPR042201 -
Cmo02g00150 989 MobiDBLite consensus disorder prediction 224 248 - -
Cmo02g00150 989 MobiDBLite consensus disorder prediction 956 970 - -
Cmo02g00150 989 SMART it6_source 471 915 IPR015425 -
Cmo02g00150 989 MobiDBLite consensus disorder prediction 150 262 - -
Cmo02g00150 989 MobiDBLite consensus disorder prediction 456 475 - -
Cmo02g00150 989 MobiDBLite consensus disorder prediction 165 198 - -
Cmo02g00150 989 MobiDBLite consensus disorder prediction 376 405 - -
Cmo02g00150 989 PANTHER FORMIN-LIKE PROTEIN 3 7 973 - -
Cmo02g00150 989 MobiDBLite consensus disorder prediction 328 477 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00150 Cmo-Chr2:734161 Cmo02g00543 Cmo-Chr2:3081604 1.17E-110 dispersed
Cmo20g00607 Cmo-Chr20:2973586 Cmo02g00150 Cmo-Chr2:734161 8.68E-17 transposed
Cmo01g01208 Cmo-Chr1:9769759 Cmo02g00150 Cmo-Chr2:734161 0 wgd
Cmo02g00150 Cmo-Chr2:734161 Cmo09g00918 Cmo-Chr9:4786856 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00150 - - cmo:103495929 723.776