Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g00159 | ATGAAAATGGGGCAGCTTACCTCTTTGGTGTTGGCTACTATAGTTTGTCTGATAGGCCTCATAGGCTCCACTCAAGCTCAGTTGCAGCTTGGTTTCTATGCCAATAGCTGCCCAAACGCTGAGAAGATTGTGCTGGACTTTGTTCATCAGCATATCCATAATGCTCCTTCACTGGCGGCAACATTCATTAGAATGCACTTCCATGATTGCTTCGTCAGGGGTTGTGATGCATCGGTTCTTATTAACACCACTTCAAATAACCAAGCTGAGAAGGATGCTCCTCCAAATCAAACACTCAGAGGCTTTGACTTCATCGATAGAGTTAAAAGCTTACTTGAAGCTGAATGCCCTGGAGTTGTGTCTTGTGCAGATGTTCTTTCCTTGGTTACTAGAGATACCATTGTAGCCACGGGAGGTCCTTACTGGGAAGTTCCAACAGGGCGAAGGGATGGAGTGATCTCAAGGTCATCAGAAGCCACAGCCAACATTCCTCCACCATCTTCAAATTTCTCAAGACTCCAAACCCTTTTCGGAAACCAAGGCCTTGATGTTAAGGACTTAGTATTACTATCTGGCGCACACACAATCGGCATAGCCCATTGCTCATCATTCCGCAACCGACTCTACAACTTCACCGGCGTCGGTGACCAAGACCCCTCCCTGGACCCAAGATACGCCGCTAATCTCAAGGCCAACAAATGCAAAACTCCCACCGACAACAGCAAAGTGGAAATGGACCCAGGGAGTCGTAAAACATTTGACCTTAGCTACTACTCTCTTCTTCTCAAACGAAGGGGCCTTTTCCAATCCGACTCTGCTCTCACTAAAGACGCAACTTCATTGGGTCTAGTTCAGAAACTTGTCGAAGGACCCATTGAAGAGTTCTTCGCTGAATTTGCTGCAGCCATGGAGAAAATGGGTCGGATTAACGTGAAGACTGGTACTGAAGGCGAAATCAGAAAGCGATGCGGCGTGGTGAATAGTTAA | 987 | 46.91 | MKMGQLTSLVLATIVCLIGLIGSTQAQLQLGFYANSCPNAEKIVLDFVHQHIHNAPSLAATFIRMHFHDCFVRGCDASVLINTTSNNQAEKDAPPNQTLRGFDFIDRVKSLLEAECPGVVSCADVLSLVTRDTIVATGGPYWEVPTGRRDGVISRSSEATANIPPPSSNFSRLQTLFGNQGLDVKDLVLLSGAHTIGIAHCSSFRNRLYNFTGVGDQDPSLDPRYAANLKANKCKTPTDNSKVEMDPGSRKTFDLSYYSLLLKRRGLFQSDSALTKDATSLGLVQKLVEGPIEEFFAEFAAAMEKMGRINVKTGTEGEIRKRCGVVNS | 328 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 771614 | 773391 | - | CmoCh02G001590.1 | Cmo02g00159 | 375756 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g00159 | 328 | PANTHER | PEROXIDASE | 13 | 327 | - | - | |
Cmo02g00159 | 328 | PRINTS | Haem peroxidase superfamily signature | 59 | 73 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00159 | 328 | PRINTS | Haem peroxidase superfamily signature | 120 | 137 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00159 | 328 | PRINTS | Haem peroxidase superfamily signature | 138 | 150 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00159 | 328 | PRINTS | Haem peroxidase superfamily signature | 186 | 201 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00159 | 328 | PRINTS | Haem peroxidase superfamily signature | 246 | 261 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00159 | 328 | ProSiteProfiles | Plant heme peroxidase family profile. | 27 | 327 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00159 | 328 | SUPERFAMILY | Heme-dependent peroxidases | 27 | 327 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00159 | 328 | CDD | secretory_peroxidase | 27 | 326 | IPR033905 | GO:0004601|GO:0042744 | |
Cmo02g00159 | 328 | Gene3D | - | 32 | 327 | - | - | |
Cmo02g00159 | 328 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 186 | 196 | IPR019793 | - | |
Cmo02g00159 | 328 | PANTHER | PEROXIDASE 25-RELATED | 13 | 327 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00159 | 328 | Gene3D | Peroxidase, domain 2 | 164 | 306 | - | - | |
Cmo02g00159 | 328 | Pfam | Peroxidase | 46 | 287 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00159 | 328 | ProSitePatterns | Peroxidases active site signature. | 59 | 70 | IPR019794 | GO:0004601 | |
Cmo02g00159 | 328 | PRINTS | Plant peroxidase signature | 37 | 56 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00159 | 328 | PRINTS | Plant peroxidase signature | 61 | 81 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00159 | 328 | PRINTS | Plant peroxidase signature | 100 | 113 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00159 | 328 | PRINTS | Plant peroxidase signature | 119 | 129 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00159 | 328 | PRINTS | Plant peroxidase signature | 138 | 153 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00159 | 328 | PRINTS | Plant peroxidase signature | 185 | 197 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00159 | 328 | PRINTS | Plant peroxidase signature | 244 | 259 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00159 | 328 | PRINTS | Plant peroxidase signature | 260 | 277 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00159 | 328 | PRINTS | Plant peroxidase signature | 301 | 314 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo02g00159 | Cmo20g00612 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00159 | Cmo-Chr2:771614 | Cmo18g01236 | Cmo-Chr18:12206483 | 1.18E-97 | dispersed | |
Cmo08g01170 | Cmo-Chr8:7444955 | Cmo02g00159 | Cmo-Chr2:771614 | 6.45E-100 | transposed | |
Cmo18g00781 | Cmo-Chr18:9350003 | Cmo02g00159 | Cmo-Chr2:771614 | 4.41E-70 | transposed | |
Cmo19g00303 | Cmo-Chr19:2222318 | Cmo02g00159 | Cmo-Chr2:771614 | 1.23E-75 | transposed | |
Cmo11g01911 | Cmo-Chr11:13273050 | Cmo02g00159 | Cmo-Chr2:771614 | 2.22E-117 | wgd | |
Cmo02g00159 | Cmo-Chr2:771614 | Cmo20g00612 | Cmo-Chr20:3001453 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g00159 | K00430 | - | csv:101213629 | 572.778 |