Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00159 ATGAAAATGGGGCAGCTTACCTCTTTGGTGTTGGCTACTATAGTTTGTCTGATAGGCCTCATAGGCTCCACTCAAGCTCAGTTGCAGCTTGGTTTCTATGCCAATAGCTGCCCAAACGCTGAGAAGATTGTGCTGGACTTTGTTCATCAGCATATCCATAATGCTCCTTCACTGGCGGCAACATTCATTAGAATGCACTTCCATGATTGCTTCGTCAGGGGTTGTGATGCATCGGTTCTTATTAACACCACTTCAAATAACCAAGCTGAGAAGGATGCTCCTCCAAATCAAACACTCAGAGGCTTTGACTTCATCGATAGAGTTAAAAGCTTACTTGAAGCTGAATGCCCTGGAGTTGTGTCTTGTGCAGATGTTCTTTCCTTGGTTACTAGAGATACCATTGTAGCCACGGGAGGTCCTTACTGGGAAGTTCCAACAGGGCGAAGGGATGGAGTGATCTCAAGGTCATCAGAAGCCACAGCCAACATTCCTCCACCATCTTCAAATTTCTCAAGACTCCAAACCCTTTTCGGAAACCAAGGCCTTGATGTTAAGGACTTAGTATTACTATCTGGCGCACACACAATCGGCATAGCCCATTGCTCATCATTCCGCAACCGACTCTACAACTTCACCGGCGTCGGTGACCAAGACCCCTCCCTGGACCCAAGATACGCCGCTAATCTCAAGGCCAACAAATGCAAAACTCCCACCGACAACAGCAAAGTGGAAATGGACCCAGGGAGTCGTAAAACATTTGACCTTAGCTACTACTCTCTTCTTCTCAAACGAAGGGGCCTTTTCCAATCCGACTCTGCTCTCACTAAAGACGCAACTTCATTGGGTCTAGTTCAGAAACTTGTCGAAGGACCCATTGAAGAGTTCTTCGCTGAATTTGCTGCAGCCATGGAGAAAATGGGTCGGATTAACGTGAAGACTGGTACTGAAGGCGAAATCAGAAAGCGATGCGGCGTGGTGAATAGTTAA 987 46.91 MKMGQLTSLVLATIVCLIGLIGSTQAQLQLGFYANSCPNAEKIVLDFVHQHIHNAPSLAATFIRMHFHDCFVRGCDASVLINTTSNNQAEKDAPPNQTLRGFDFIDRVKSLLEAECPGVVSCADVLSLVTRDTIVATGGPYWEVPTGRRDGVISRSSEATANIPPPSSNFSRLQTLFGNQGLDVKDLVLLSGAHTIGIAHCSSFRNRLYNFTGVGDQDPSLDPRYAANLKANKCKTPTDNSKVEMDPGSRKTFDLSYYSLLLKRRGLFQSDSALTKDATSLGLVQKLVEGPIEEFFAEFAAAMEKMGRINVKTGTEGEIRKRCGVVNS 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 771614 773391 - CmoCh02G001590.1 Cmo02g00159 375756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00159 328 PANTHER PEROXIDASE 13 327 - -
Cmo02g00159 328 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00159 328 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00159 328 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00159 328 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00159 328 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00159 328 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00159 328 SUPERFAMILY Heme-dependent peroxidases 27 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo02g00159 328 CDD secretory_peroxidase 27 326 IPR033905 GO:0004601|GO:0042744
Cmo02g00159 328 Gene3D - 32 327 - -
Cmo02g00159 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Cmo02g00159 328 PANTHER PEROXIDASE 25-RELATED 13 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00159 328 Gene3D Peroxidase, domain 2 164 306 - -
Cmo02g00159 328 Pfam Peroxidase 46 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00159 328 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Cmo02g00159 328 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00159 328 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00159 328 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00159 328 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00159 328 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00159 328 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00159 328 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00159 328 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00159 328 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00159 Cmo20g00612 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00159 Cmo-Chr2:771614 Cmo18g01236 Cmo-Chr18:12206483 1.18E-97 dispersed
Cmo08g01170 Cmo-Chr8:7444955 Cmo02g00159 Cmo-Chr2:771614 6.45E-100 transposed
Cmo18g00781 Cmo-Chr18:9350003 Cmo02g00159 Cmo-Chr2:771614 4.41E-70 transposed
Cmo19g00303 Cmo-Chr19:2222318 Cmo02g00159 Cmo-Chr2:771614 1.23E-75 transposed
Cmo11g01911 Cmo-Chr11:13273050 Cmo02g00159 Cmo-Chr2:771614 2.22E-117 wgd
Cmo02g00159 Cmo-Chr2:771614 Cmo20g00612 Cmo-Chr20:3001453 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00159 K00430 - csv:101213629 572.778