Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00199 ATGCCGAGGGGTTTGAAGAGTAATTGCCAGTCTACTTCTCATCAGCTTTTGAAGGAAAAAGCAAAGAACCGTGTGAATGATCTTCAAGGGATATTCACTAATCTTCAATCTGCAAGGAAGGAGAGTCGTACTACTGACGTTGCTGTCTTGGAGGAGCAAGTGCATCAGATGCTCAGGGAGTGGAATGCCGAGCTCAATGAACCATCCCCTGCCTCTTCATTTGTTGAGGGCAGTCTTGGATCGTTCTCGCAAGAATTAGCTCGTCTTCTCGAGCATTTTGATGAGGAAGATGATGCAACTAGCACATTGGCTGAACCAAAGGTTGAGCCTGATCAACATTGCGTTCTTGCTTGCAATCCGTCCGATTTTCAGCAGCAGCAGAGTGTTCTTGGATTTGAAGAGTGCAAAGTCAATAGTGAAGATTTCAAATTAGATCAGAACTTTATGCAGAACTTAGTGGTCGGTATGGATGATATGTCTACTGTGGATTGTCGTTTATTGGATTCGCACCAAGAGTTCGACTATGGGGTGCTTATCGGGGCGTATGATGCGGGAGACTTTAGTCAGGACACAAAGCCTAGCATTCCCCCATACATCTCGCCCCCGCCATCTGCTTTTATGGGGCCAATGTGTGCACTCTGGGATTGTTTCAGACCTGCTCAAGGATCTAAATGGTGCCAGGACTATTGCAGTAGCTCTCATTCCATGCTTGCAATAAATGAAGGCCTTCCAGGAATGGCTCCAATATTGCGCCCTGGGGGCACTGGCTTAACAGATGGTCCACTATTTGCTGCTCTTCTTGCAAAGACACAGGCCAAAGAGGTGGGAATACCTATATGTGATGGTGCTGCAACAAGAAAATCTCCATGGAATGCTCCTGAGCTTTTTGATATTTCATTTCTCGAGGGTGAGACAATCAGGGAATGGCTCTATTTCGACAAACCTAGACGGGCCTTTGAGAGTGGTACTCGAAAGCAAAGGTCATTACCAGATTATAGCGGCCGTGGTTGGCATGAATCAAGGAAGAAGGTGATGGAGGAGTTCGGTGGTCAGAAGAAGTCCTATTACATGGATCCACAGCCATCAAGCTCACTCGAATGGCATTTGTACGAATATGATATAAGCAATTATGATTCATTTGCATTATATAGGCTAGAACTCAAGCAAGCTGGTGCAAAAAAGAGCCCAAAGGGAAAACTACCAGCTGATCCTCTGGCTGATCTGCAGAAGAAGATGGGCAGGCTTACTGCAAAGGGGCCTGTGGAGCTTGGACAATCAGTCAAATAA 1287 46.08 MPRGLKSNCQSTSHQLLKEKAKNRVNDLQGIFTNLQSARKESRTTDVAVLEEQVHQMLREWNAELNEPSPASSFVEGSLGSFSQELARLLEHFDEEDDATSTLAEPKVEPDQHCVLACNPSDFQQQQSVLGFEECKVNSEDFKLDQNFMQNLVVGMDDMSTVDCRLLDSHQEFDYGVLIGAYDAGDFSQDTKPSIPPYISPPPSAFMGPMCALWDCFRPAQGSKWCQDYCSSSHSMLAINEGLPGMAPILRPGGTGLTDGPLFAALLAKTQAKEVGIPICDGAATRKSPWNAPELFDISFLEGETIREWLYFDKPRRAFESGTRKQRSLPDYSGRGWHESRKKVMEEFGGQKKSYYMDPQPSSSLEWHLYEYDISNYDSFALYRLELKQAGAKKSPKGKLPADPLADLQKKMGRLTAKGPVELGQSVK 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 932111 934978 - CmoCh02G001990.1 Cmo02g00199 375796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00199 428 PANTHER TRANSCRIPTION FACTOR VOZ1 1 428 IPR039277 GO:0006355|GO:0048578
Cmo02g00199 428 Coils Coil 18 38 - -
Cmo02g00199 428 PANTHER TRANSCRIPTION FACTOR VOZ2 1 428 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00199 Cmo20g00652 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00199 Cmo-Chr2:932111 Cmo07g00212 Cmo-Chr7:1063694 1.83E-173 dispersed
Cmo02g00199 Cmo-Chr2:932111 Cmo20g00652 Cmo-Chr20:3187678 0 wgd
Cmo02g00199 Cmo-Chr2:932111 Cmo03g01297 Cmo-Chr3:9786940 3.26E-168 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
9198 None None None None Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00199 - - cmax:111469812 863.988