Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g00223 | ATGCTGAGACAAAACGTTCACTTGTCGTTAACAAAATGTATTGCCAAGAACTTTCCTTGTCTGGTGATGGTAAATGTTTTCTATATATTTCCGTCCGGCATCAACACCAAGATGCCAGCTGATAATTCAATTCCATTTGACAGAGATGCCGAGCCTTTTGTTGAGGTCGATCCAACTGGAAGGTTTGGACGATACGATGATCTTCTTGGGTCTGGAGCAGTGAAGAAAGTATATCGGGCATTTGATCAGGAGGAAGGTATAGAGGTTGCTTGGAATCAGGTTCGATTGAGGAAATTCAGTGGGGATCCAGTGTTCATCAACCGCTTGAGATCGGAGGTTCAGCTGCTGAGCACGTTGAGTAACGATTATATCATAGTTTGCTACAGTGTTTGGAATGATGATGAGCACAATACGTTGAATTTCATTACCGAGGTGTGTACATCAGGAAATCTGAGGGATTATCGTAAGAAACATCGACATGTGTCAATTAAGGCCTTGAAGAAGTGGTCAAAGCAGGTACTTGAGGGATTGGATTATCTTCATAATCATGAGCCTTGCATTATTCATCGAGATCTCAACTGCAGTAACATATTTGTCAATGGGAATATTGGTCAGGTGAAAATAGGTGATCTAGGTTTTGCAGCTATAGTTGGCAAGAGTCATGCTGCGCACTCAATCATAGGCACACCGGAGTATATGGCACCAGAACTGTACGAGGAAGATTACACAGAGATGGTGGATATATACTCTTTTGCGATGTGTTTGCTTGAGATGGTCACGATGGAGATACCATACAGTGAATGTGATAGTATTGCCAAGATATACAAGAAGGTGACGACTGGAATAAAACCCCAAGCATTAAACAAAGTGACAAATGATGAAGTCAGGGCTTTCATTGAGAAGTGCATTGCACAACCAAGGGCAAGGCCTACCACTTCTGAACTTCTCAAGGACCCCTTCTTCGATGAAGTCAGGGATGAAGATTCCGAACAGAGTTATTAG | 1002 | 42.42 | MLRQNVHLSLTKCIAKNFPCLVMVNVFYIFPSGINTKMPADNSIPFDRDAEPFVEVDPTGRFGRYDDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLRKFSGDPVFINRLRSEVQLLSTLSNDYIIVCYSVWNDDEHNTLNFITEVCTSGNLRDYRKKHRHVSIKALKKWSKQVLEGLDYLHNHEPCIIHRDLNCSNIFVNGNIGQVKIGDLGFAAIVGKSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFAMCLLEMVTMEIPYSECDSIAKIYKKVTTGIKPQALNKVTNDEVRAFIEKCIAQPRARPTTSELLKDPFFDEVRDEDSEQSY | 333 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1026703 | 1031754 | - | CmoCh02G002230.1 | Cmo02g00223 | 375820 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g00223 | 333 | SUPERFAMILY | Protein kinase-like (PK-like) | 56 | 322 | IPR011009 | - | |
Cmo02g00223 | 333 | Gene3D | Transferase(Phosphotransferase) domain 1 | 146 | 327 | - | - | |
Cmo02g00223 | 333 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 38 | 325 | - | - | |
Cmo02g00223 | 333 | Gene3D | Phosphorylase Kinase; domain 1 | 48 | 144 | - | - | |
Cmo02g00223 | 333 | ProSiteProfiles | Protein kinase domain profile. | 63 | 321 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo02g00223 | 333 | Pfam | Protein kinase domain | 67 | 321 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo02g00223 | 333 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED | 38 | 325 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo02g00223 | Cmo11g01840 | CCT | |
Cmo02g00223 | Cmo19g00886 | CCT | |
Cmo02g00223 | Cmo19g00886 | ECH | |
Cmo02g00223 | Cmo11g01840 | ECH | |
Cmo02g00223 | Cmo20g00670 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00223 | Cmo-Chr2:1026703 | Cmo06g00880 | Cmo-Chr6:5019086 | 3.71E-163 | dispersed | |
Cmo16g00981 | Cmo-Chr16:6714689 | Cmo02g00223 | Cmo-Chr2:1026703 | 1.88E-154 | wgd | |
Cmo02g00223 | Cmo-Chr2:1026703 | Cmo20g00670 | Cmo-Chr20:3271666 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74085 | PF00069 | Pkinase | 1.30E-50 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g00223 | K08867 | - | csv:101222153 | 580.482 |