Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00245 ATGGGTTCTTCAAAGCTGCCTCCTTCCACGACGGTGCTGAAATGGCTGGGATTTGTCTCCGCCGTCTGGGTTCAAGCCATTTCCGGCAACAACTACACCTTCTCCAACTACTCCGACGCCCTCAAATCTCTCATGAGTCTTACCCAACTTCAGCTCAACAATCTCTCCGTCGCTAAAGACGTCGGTAAAGCCTTCGGTCTTCTCGCCGGAATCGCCTCTGATCGGTTTCCGACATGGGTCATCTTGCTCATCGGATCCCTTGAAGGTCTCATTGGCTATGGCGCTCAATGGCTCGTCGTTAGCCAGAGAATTTCCCCTCTTCCTTACTGGCAGATGTGTTTCTTTCTGTGTTTGGGCGGAAACAGTACCACGTGGATGAACACGGCGGTTCTGGTTACCTGTATCAGAAACTTCCGGAAGAATCGCGGCCCGGTTTCCGGTATTCTCAAAGGCTATGTCGGCCTTAGTACCGCCATTTTCACTGACCTCTGTACTGCTCTGTTTTCCGATGACCCATCTTCCTTCCTCGTCATGCTCGCCGTCGTCCCCTTTGCCGTCTGTCTCTTCGCCATGTTCTTCCTCCGTGAGATTCCGTCTACAGCAACCGCCAACGCCCAAGAAGAGTCCAGTTTCTTCGCCGTCTTTAACGCCCTCGCCGTCGTCGTCGCCGTCTATCTCTTAGGCTTCGATTTCATCAAAAACTCCGGCAAAGTCGTTTCCCAGTTGTTCTCTGTCGGATTATTGATTCTCCTCGGATCCCCTTTGGTTATTCCGATTTACTCGTTTATCAAGAGCTGGAATTCGAATCAAACCCAATTGGATTTAGAGGCTAAAATTGAGGAGCCATTGCTTAAGGAAGAAGCCACGGCGGCGGCCGTTGAACAGAGTACGGTGGTGAAGGAGGAAGAAATAACAGAGGAGAGAACACCGCCGGTGATCGGCGAAGAACACACGATTTTTGAAGCGATGAAAACGGTGGATTTCTGGGTTTTGTTCGTGTCGTTTCTCTGCGGCGTGGGGACTGGATTGGCGGTGATGAACAACATGGGCCAGATCGGATTAGCTCTTGGTTACGCCGATGTTTCCATGTTCGTTTCTCTGACTAGCATCTGGGGCTTTTTCGGCCGGATTCTCGCCGGCACAATTTCCGAGCACTTTCTCAAAAAATCCGGCACACCGAGGCCTTTATGGAACGCCGCATCTCAAATTCTAATGACAATTGGATACATTCTAATGGCAATGGCAATGCCAGGGTCTCTCTACATCGGTTCGATGGTCGTCGGGATTTGCTACGGCGTACGTCTCTCCATCACCGTCCCCACCGCGTCGGAGCTCTTCGGGCTCAAATACTACGGTCTAATTTACAACATTCTGATCCTCAACCTCCCGATCGGTTCGTTCCTGTTCTCGGGGCTCCTCGCCGGGTTCCTCTATGACATGGAGGCGACACCGACCCCGGGCGGCGGGAACACGTGCATCGGTGGGCATTGTTACAGAATCGTGTTCGTTGTGATGGCTTTAGCTTGTGTGATTGGGTTTGTTTTGGACATTTGGTTGGCGTTTAGAACCAAGGTGCTTTATTCAAAGCTGAAAGCCAACAAGAAATCAAACAAGGGGAGCTCTTAG 1626 51.29 MGSSKLPPSTTVLKWLGFVSAVWVQAISGNNYTFSNYSDALKSLMSLTQLQLNNLSVAKDVGKAFGLLAGIASDRFPTWVILLIGSLEGLIGYGAQWLVVSQRISPLPYWQMCFFLCLGGNSTTWMNTAVLVTCIRNFRKNRGPVSGILKGYVGLSTAIFTDLCTALFSDDPSSFLVMLAVVPFAVCLFAMFFLREIPSTATANAQEESSFFAVFNALAVVVAVYLLGFDFIKNSGKVVSQLFSVGLLILLGSPLVIPIYSFIKSWNSNQTQLDLEAKIEEPLLKEEATAAAVEQSTVVKEEEITEERTPPVIGEEHTIFEAMKTVDFWVLFVSFLCGVGTGLAVMNNMGQIGLALGYADVSMFVSLTSIWGFFGRILAGTISEHFLKKSGTPRPLWNAASQILMTIGYILMAMAMPGSLYIGSMVVGICYGVRLSITVPTASELFGLKYYGLIYNILILNLPIGSFLFSGLLAGFLYDMEATPTPGGGNTCIGGHCYRIVFVVMALACVIGFVLDIWLAFRTKVLYSKLKANKKSNKGSS 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1149456 1151582 - CmoCh02G002450.1 Cmo02g00245 375842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00245 541 SUPERFAMILY MFS general substrate transporter 59 524 IPR036259 -
Cmo02g00245 541 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 537 - -
Cmo02g00245 541 Pfam Nodulin-like 14 259 IPR010658 -
Cmo02g00245 541 Gene3D MFS general substrate transporter like domains 10 209 IPR036259 -
Cmo02g00245 541 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 9 537 - -
Cmo02g00245 541 CDD MFS_Mch1p_like 13 512 - -
Cmo02g00245 541 Gene3D MFS general substrate transporter like domains 325 538 IPR036259 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00245 Cmo11g01732 CCT
Cmo02g00245 Cmo20g00758 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00245 Cmo-Chr2:1149456 Cmo11g01732 Cmo-Chr11:12254138 0 dispersed
Cmo08g00953 Cmo-Chr8:6197534 Cmo02g00245 Cmo-Chr2:1149456 3.24E-79 transposed
Cmo13g00013 Cmo-Chr13:152677 Cmo02g00245 Cmo-Chr2:1149456 1.05E-85 transposed
Cmo16g00565 Cmo-Chr16:2751710 Cmo02g00245 Cmo-Chr2:1149456 3.34E-85 transposed
Cmo02g00245 Cmo-Chr2:1149456 Cmo20g00758 Cmo-Chr20:3808290 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00245 - - cmos:111448555 897.501