Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g00266 | ATGGGAGCTTCCATTGACGTGTTAATTGCTATGTGGATATTTTGGAGGGTTGTTTGGTCGAACCGACATGTCCACAAAGGTTCAGATGCTGGTGGGCGACAGGATGGTCTCCTATGGTACAAGGATAGTGGACAGCATGCCAATGGTGAGTTTTCAATGGCTGTAGTTCAAGCTAACAATTTACTTGAAGATCAAAGCCAGATAGAGTCAGGCAATTTGAGCTTGCACGAGTCGGGACCATATGGTACCTTTGTTGGAGTGTATGATGGGCATGGAGGGCCCGAGACGTCGCGCTATGTTAACGATCACCTTTTCCAGCATCTTAAAAGGTTTACTTCAGAGCAACAATCCATGTCCGTGGATGTCATAAGAAAGGCCTTTCAAGCTACAGAAGACGGGGTCGTTGCTCAAGTTTCGAAACAATGGTCGATGAGGCCACAAATTGCAGCTGTTGGATCTTGCTGCCTTGTTGGTGTAATTTGTGGTGGAACCCTTTACATTGCTAACCTTGGCGATTCACGAGCTGTTTTAGGGCGAGTCGTGAAAGCAACAGGGGAAGTTTTGTCCGTTCAGTTGTCGGCCGAGCATAATGCATCTATAGAGTCTGTTCGGCACGAGCTACGTGCTCTGCATCCCGATGACCCCCAGATTGTAGTTTTGAAGCATAATGTATGGCGCGTGAAGGGTCTTATACAGGTTTCTCGATCGATCGGCGATGTCTATTTGAAGAAAGCTGAATTCAACCGAGAGCCTCTTTATGCCAAGTTTCGCCTTCGTGAACCGATCACAAAGCCGATACTGAGTGCCGAACCATCTATTTCGGTGCTTCAGTTACAGCCACAGGATCAATTTATTATATTTGCTTCAGATGGGCTCTGGGAACACCTTAGCAACCAGGAAGCTGTGGATATTGTCCAAAATCATCCACGTAGTGGAAGTGCAAGGAGGCTAGTGAAAGCAGCACTGCTAGAGGCAGCAAAGAAGAGAGAAATGAGATACTCCGACTTGAAGAAGATCGACCGTGGCGTACGGCGACATTTCCACGATGACATTACAGTGGTTGTTGTGTTTCTCGACTCAAACCTCGTGAGCCGAGGTAGCTCTACAAAATGTGGAAGCATATCCATACGAGGGGGCGGAGTTAACTTACGTCCAAACTCATTGGCCCCTTGCACCACGCCATCAGACAACAGCATGGCCTGA | 1203 | 47.71 | MGASIDVLIAMWIFWRVVWSNRHVHKGSDAGGRQDGLLWYKDSGQHANGEFSMAVVQANNLLEDQSQIESGNLSLHESGPYGTFVGVYDGHGGPETSRYVNDHLFQHLKRFTSEQQSMSVDVIRKAFQATEDGVVAQVSKQWSMRPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLSVQLSAEHNASIESVRHELRALHPDDPQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPITKPILSAEPSISVLQLQPQDQFIIFASDGLWEHLSNQEAVDIVQNHPRSGSARRLVKAALLEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRGSSTKCGSISIRGGGVNLRPNSLAPCTTPSDNSMA | 400 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1281411 | 1285521 | + | CmoCh02G002660.1 | Cmo02g00266 | 375863 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g00266 | 400 | Pfam | Protein phosphatase 2C | 81 | 329 | IPR001932 | - | |
Cmo02g00266 | 400 | Gene3D | - | 39 | 368 | IPR036457 | - | |
Cmo02g00266 | 400 | SMART | PP2C_4 | 42 | 356 | IPR001932 | - | |
Cmo02g00266 | 400 | SUPERFAMILY | PP2C-like | 59 | 359 | IPR036457 | - | |
Cmo02g00266 | 400 | CDD | PP2Cc | 51 | 358 | IPR001932 | - | |
Cmo02g00266 | 400 | ProSiteProfiles | PPM-type phosphatase domain profile. | 50 | 358 | IPR001932 | - | |
Cmo02g00266 | 400 | PANTHER | ALPHABET, ISOFORM E-RELATED | 20 | 390 | - | - | |
Cmo02g00266 | 400 | ProSitePatterns | PPM-type phosphatase domain signature. | 84 | 92 | IPR000222 | GO:0043169 | |
Cmo02g00266 | 400 | PANTHER | PROTEIN PHOSPHATASE 2C FAMILY PROTEIN | 20 | 390 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo02g00266 | Cmo11g01752 | CCT | |
Cmo02g00266 | Cmo19g00763 | CCT | |
Cmo02g00266 | Cmo20g00737 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00266 | Cmo-Chr2:1281411 | Cmo03g00683 | Cmo-Chr3:6014543 | 0 | dispersed | |
Cmo06g00334 | Cmo-Chr6:1625882 | Cmo02g00266 | Cmo-Chr2:1281411 | 0 | dispersed | |
Cmo11g01752 | Cmo-Chr11:12348584 | Cmo02g00266 | Cmo-Chr2:1281411 | 0 | wgd | |
Cmo19g00763 | Cmo-Chr19:7736007 | Cmo02g00266 | Cmo-Chr2:1281411 | 0 | wgd | |
Cmo02g00266 | Cmo-Chr2:1281411 | Cmo20g00737 | Cmo-Chr20:3678588 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g00266 | - | K01102 | csv:101221640 | 717.227 |