Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00266 ATGGGAGCTTCCATTGACGTGTTAATTGCTATGTGGATATTTTGGAGGGTTGTTTGGTCGAACCGACATGTCCACAAAGGTTCAGATGCTGGTGGGCGACAGGATGGTCTCCTATGGTACAAGGATAGTGGACAGCATGCCAATGGTGAGTTTTCAATGGCTGTAGTTCAAGCTAACAATTTACTTGAAGATCAAAGCCAGATAGAGTCAGGCAATTTGAGCTTGCACGAGTCGGGACCATATGGTACCTTTGTTGGAGTGTATGATGGGCATGGAGGGCCCGAGACGTCGCGCTATGTTAACGATCACCTTTTCCAGCATCTTAAAAGGTTTACTTCAGAGCAACAATCCATGTCCGTGGATGTCATAAGAAAGGCCTTTCAAGCTACAGAAGACGGGGTCGTTGCTCAAGTTTCGAAACAATGGTCGATGAGGCCACAAATTGCAGCTGTTGGATCTTGCTGCCTTGTTGGTGTAATTTGTGGTGGAACCCTTTACATTGCTAACCTTGGCGATTCACGAGCTGTTTTAGGGCGAGTCGTGAAAGCAACAGGGGAAGTTTTGTCCGTTCAGTTGTCGGCCGAGCATAATGCATCTATAGAGTCTGTTCGGCACGAGCTACGTGCTCTGCATCCCGATGACCCCCAGATTGTAGTTTTGAAGCATAATGTATGGCGCGTGAAGGGTCTTATACAGGTTTCTCGATCGATCGGCGATGTCTATTTGAAGAAAGCTGAATTCAACCGAGAGCCTCTTTATGCCAAGTTTCGCCTTCGTGAACCGATCACAAAGCCGATACTGAGTGCCGAACCATCTATTTCGGTGCTTCAGTTACAGCCACAGGATCAATTTATTATATTTGCTTCAGATGGGCTCTGGGAACACCTTAGCAACCAGGAAGCTGTGGATATTGTCCAAAATCATCCACGTAGTGGAAGTGCAAGGAGGCTAGTGAAAGCAGCACTGCTAGAGGCAGCAAAGAAGAGAGAAATGAGATACTCCGACTTGAAGAAGATCGACCGTGGCGTACGGCGACATTTCCACGATGACATTACAGTGGTTGTTGTGTTTCTCGACTCAAACCTCGTGAGCCGAGGTAGCTCTACAAAATGTGGAAGCATATCCATACGAGGGGGCGGAGTTAACTTACGTCCAAACTCATTGGCCCCTTGCACCACGCCATCAGACAACAGCATGGCCTGA 1203 47.71 MGASIDVLIAMWIFWRVVWSNRHVHKGSDAGGRQDGLLWYKDSGQHANGEFSMAVVQANNLLEDQSQIESGNLSLHESGPYGTFVGVYDGHGGPETSRYVNDHLFQHLKRFTSEQQSMSVDVIRKAFQATEDGVVAQVSKQWSMRPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLSVQLSAEHNASIESVRHELRALHPDDPQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPITKPILSAEPSISVLQLQPQDQFIIFASDGLWEHLSNQEAVDIVQNHPRSGSARRLVKAALLEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRGSSTKCGSISIRGGGVNLRPNSLAPCTTPSDNSMA 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1281411 1285521 + CmoCh02G002660.1 Cmo02g00266 375863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00266 400 Pfam Protein phosphatase 2C 81 329 IPR001932 -
Cmo02g00266 400 Gene3D - 39 368 IPR036457 -
Cmo02g00266 400 SMART PP2C_4 42 356 IPR001932 -
Cmo02g00266 400 SUPERFAMILY PP2C-like 59 359 IPR036457 -
Cmo02g00266 400 CDD PP2Cc 51 358 IPR001932 -
Cmo02g00266 400 ProSiteProfiles PPM-type phosphatase domain profile. 50 358 IPR001932 -
Cmo02g00266 400 PANTHER ALPHABET, ISOFORM E-RELATED 20 390 - -
Cmo02g00266 400 ProSitePatterns PPM-type phosphatase domain signature. 84 92 IPR000222 GO:0043169
Cmo02g00266 400 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 20 390 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00266 Cmo11g01752 CCT
Cmo02g00266 Cmo19g00763 CCT
Cmo02g00266 Cmo20g00737 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00266 Cmo-Chr2:1281411 Cmo03g00683 Cmo-Chr3:6014543 0 dispersed
Cmo06g00334 Cmo-Chr6:1625882 Cmo02g00266 Cmo-Chr2:1281411 0 dispersed
Cmo11g01752 Cmo-Chr11:12348584 Cmo02g00266 Cmo-Chr2:1281411 0 wgd
Cmo19g00763 Cmo-Chr19:7736007 Cmo02g00266 Cmo-Chr2:1281411 0 wgd
Cmo02g00266 Cmo-Chr2:1281411 Cmo20g00737 Cmo-Chr20:3678588 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00266 - K01102 csv:101221640 717.227