Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo02g00319 | ATGGCGGCTACTATGTCACCGTGGGGCAAGCCTGGAGCTTGGGCTCTGGATGCGGAGGAGCACGAGGCTGAGCTTCTCAAGGATCAGCAGGAGCAATCCCGTTCGCAATCGGAGCCCAGTGCCGACTTTCCGTCTCTCGCCGCCGCGGCTGCCACCAAGCCTAAGAAGAAGAAAGGTCAGTCCATTCCCCTCTCGGAGTTTCATACCTATGGTGGTCCTAAGCCGTCGGCTCAATCCAGTGAGCCAAAGGGTCTTACGACCGAAGATCTAATGATGCTTCCGACGGGTCCGCGTCAGCGAACGGAGGAGGAACTGGACCGCAACCGGCTCGGAGGTGGTTTCAAGAGTTGGGGTCAGAATAGTTTGTATGACAGGGGGAATCGGTATTCTAATGGTGAAGATTCGTCGAATTCTCGACGCGGTTCTAGGGTTTTTGATGAGTCGAGGAGGAGTGGTGATGGATCCGATAGGGAGTTTGGAAGGGAGTCGTTGCCTTCTAGGGCTGATGAGATTGATGATTGGGGCGCTGGGAAGAAGCCTATGATGGGCAATGGCTTTGAAAGGAGAGACAGAGGAGGAGGAGGAGGCTTTTTCGATTCGCATTCATCGAAAGCTGACGAATCGGATAGTTGGGTGTCGAATAAAAGCTTTTCACCTTCTGATGGTCGGAGATCAGGCGGTAGAGGTGGTGGATTTGAGAGAGAGCGAAGAGTAGGCTTTCCCTCGAACGGTGGTGGCGCTGATTCGGACAATTGGGACCGAAAATCTGAAGGTTCCAGGGGTAGAATTGGTGAGAATGGTGGTGGGGCTGATTCAGATAGCTGGGGAAAAAGATCTGAAGCATCCAGAGGTGGTATTAGTGAGCGGCCGAGGCTTAATCTACAGCCTCGTTCACTCCCTTTGAACAATGGGAATCAGGAGGCTTCTGGTGCCGCAGTGAAGCCAAAGGCTTCCAATCCTTTTGGAAATGCTAGACCAAGGGAACAAGTATTGGCTGACAAGGGTCAGGACTGGAAGAAAATTGATGAGAAGCTCGAGTCAATGAAAATTAAGGACACGGTTGTGAGAGCTGAGAGATCTAGTGGGGCTTCCTTCGAGAGAAAAGGCTTTGGAAGTCGAAATGCTTGGTCTCCTCAAGATCGTTCAGGGAGCGCATGGAGGAGGCCAGAATCTTTGGAGTCTCGTCCCCAGAGTGCTGAGGCGGTTGATGTTGGACCTGCTGAGGAAAACTGA | 1233 | 52.55 | MAATMSPWGKPGAWALDAEEHEAELLKDQQEQSRSQSEPSADFPSLAAAAATKPKKKKGQSIPLSEFHTYGGPKPSAQSSEPKGLTTEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLYDRGNRYSNGEDSSNSRRGSRVFDESRRSGDGSDREFGRESLPSRADEIDDWGAGKKPMMGNGFERRDRGGGGGFFDSHSSKADESDSWVSNKSFSPSDGRRSGGRGGGFERERRVGFPSNGGGADSDNWDRKSEGSRGRIGENGGGADSDSWGKRSEASRGGISERPRLNLQPRSLPLNNGNQEASGAAVKPKASNPFGNARPREQVLADKGQDWKKIDEKLESMKIKDTVVRAERSSGASFERKGFGSRNAWSPQDRSGSAWRRPESLESRPQSAEAVDVGPAEEN | 410 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 1634465 | 1636823 | - | CmoCh02G003190.1 | Cmo02g00319 | 375916 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo02g00319 | 410 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 | 1 | 393 | - | - | |
| Cmo02g00319 | 410 | MobiDBLite | consensus disorder prediction | 354 | 410 | - | - | |
| Cmo02g00319 | 410 | MobiDBLite | consensus disorder prediction | 1 | 336 | - | - | |
| Cmo02g00319 | 410 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B | 1 | 393 | IPR010433 | GO:0003743 | |
| Cmo02g00319 | 410 | Coils | Coil | 16 | 36 | - | - | |
| Cmo02g00319 | 410 | MobiDBLite | consensus disorder prediction | 15 | 31 | - | - | |
| Cmo02g00319 | 410 | MobiDBLite | consensus disorder prediction | 139 | 176 | - | - | |
| Cmo02g00319 | 410 | MobiDBLite | consensus disorder prediction | 120 | 138 | - | - | |
| Cmo02g00319 | 410 | Pfam | Plant specific eukaryotic initiation factor 4B | 7 | 232 | IPR010433 | GO:0003743 | |
| Cmo02g00319 | 410 | Pfam | Plant specific eukaryotic initiation factor 4B | 203 | 368 | IPR010433 | GO:0003743 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cmo02g00319 | Cmo11g01728 | CCT | |
| Cmo02g00319 | Cmo20g00764 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo02g00319 | Cmo-Chr2:1634465 | Cmo11g01728 | Cmo-Chr11:12225354 | 1.81E-124 | dispersed | |
| Cmo02g00319 | Cmo-Chr2:1634465 | Cmo20g00764 | Cmo-Chr20:3837167 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo02g00319 | - | - | csv:101214573 | 640.573 |