Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00410 ATGTCTGATTCATCGGATTCTCCCTCTCCTTCTTCCGAATCGGATTCGGATTCTGGTTCCTCTCCCCCGCCTCCGTCTGATTCATCTCCACCTGCGCCCGAGTCCTCTCCGCCACCGCCGCAGGATGTTTCTCCGCCTCCTCCGACTGGTTCATCTCCACCTCCTCCGAATGCATCGCCGCCACCGCCGAATGACTCAACGTCTTCATCTCCTCCATCTCCTCCATCTCCTCCTCCGCCTCCTCCACCGCCACCACCTCCTCCGCCTTCTCCTCCACCTCCTGGATCCTCCAGGCATACTTCTCCGCCGAAATCGATCTCCTCCTCGCCTCATTCCCGATCCTCGGACTCCTCATCCGGCGACTCTACGCCTGAGGTGGTTCCGATTATTGTAGGAGTGGCGGTGGCGGCAGGATTTTTGCTATTCGCCATGGCACTGATATTCTTCGCTTGCAGCCGAAAGAAAAAGAAGCGTGAGAGTAATACCGTATACTACGATGATCGGCCTAATCAGAAAGGTGGGGACCCCTATTACAACGGAAGGAATCAGAACTGGAACGGTACGGGCGAACATTTCGTGAACATACCGCCAGCCACCGGCGGAGGGCAAGGAGGAGGATGGCCACCGCCAGCCACCGGCGGTGGGCAGGGAGGAGCATGGCCACCGCCAGCCCCCGGCGGAGGGCAAGGAGGAGCATGGCCACCGCCAGCCCCCGGCGGAGGGCAAGGAGGAGTATGGCCACCGCCGCCGCCACCACCGGGATTATTAAGCAGCGACATGAGCTCAAGCTTCTCAGGGCCACATGGGCCACCGTTACCACCGCCACACCCGTCGGTGGCGCTGGGGTTCAATAAAAACACGTTCACATTCGACGAGCTGATGGCAGCGACAAGCGGATTCTCTCCGGCGAACTTGTTAGGGCAAGGCGGATTCGGATACGTTCATAAAGGAGTGCTGCCCAACGGCAAGGAAATTGCCGTAAAAAGCCTTAAAACAGGTAGCGGACAAGGAGATCGGGAATTCGCGGCGGAAGTAGAGATTATCAGCCGCGTCCACCACCGTCATTTGGTATCCCTCGTCGGTCATCCTCGCATCATCCATAGAGACATTAAGACGGCAAATATTCTTATAGACATGAGTTTTGAAGCAAAGGTGGCTGATTTTGGATTGGCTAAGCTCAACCAGGACAATTACACTCATGTATCCACTCGCGTTATGGGCACATTTGGTTATTTGGCTCCGGAATATGCATCAAGTGGGAAGCTAACAGAGAAATCAGACGTATTTTCATACGGAGTAATGCTTTTGGAGATCATAACTGGAAGACGACCCGTGGACGCATCGGGGGAGCTGATGGAGGACAGCTTAGTGGATTGGGCGAGGCCTCTATGCTTGAAAGCAATGACTGAAGGAGCCTACGAGGCGTTGGCAGATCCAAGATTGGAGAAGGACTACGACGCTCAGGAAATGGCATGCATGGTGGCTTGTGCTGCTGCATGCATTCGCCATTCTGCTAAACGCCGTCCCAAAATGAGCCAAGTTGTGCGGGCACTCGAAGGCGACGTATCGATGGAGGATTTGAACGACGGAGTAAAGCCAGGCCAAAGCTCATACTTCGGCTCCGGTACGTCGTCGGATTACGACGCAAGCTCTTACAGCGCCGACATGAAAAGGTTCAGAAAGGTAGCGTTGGAAAGCCGGGAATATACAAGCAGTGATTATGGTGGGACGAGCGAGTATGGGCTAAACCCATCAGCGACGAGCAGTGACAATAGTCAGAAGCCAAGCCAAGCGTCATCGCCCAATTTACAGCCCAACAAACCCTAA 1827 55.12 MSDSSDSPSPSSESDSDSGSSPPPPSDSSPPAPESSPPPPQDVSPPPPTGSSPPPPNASPPPPNDSTSSSPPSPPSPPPPPPPPPPPPPSPPPPGSSRHTSPPKSISSSPHSRSSDSSSGDSTPEVVPIIVGVAVAAGFLLFAMALIFFACSRKKKKRESNTVYYDDRPNQKGGDPYYNGRNQNWNGTGEHFVNIPPATGGGQGGGWPPPATGGGQGGAWPPPAPGGGQGGAWPPPAPGGGQGGVWPPPPPPPGLLSSDMSSSFSGPHGPPLPPPHPSVALGFNKNTFTFDELMAATSGFSPANLLGQGGFGYVHKGVLPNGKEIAVKSLKTGSGQGDREFAAEVEIISRVHHRHLVSLVGHPRIIHRDIKTANILIDMSFEAKVADFGLAKLNQDNYTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSYGVMLLEIITGRRPVDASGELMEDSLVDWARPLCLKAMTEGAYEALADPRLEKDYDAQEMACMVACAAACIRHSAKRRPKMSQVVRALEGDVSMEDLNDGVKPGQSSYFGSGTSSDYDASSYSADMKRFRKVALESREYTSSDYGGTSEYGLNPSATSSDNSQKPSQASSPNLQPNKP 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2119774 2122583 - CmoCh02G004100.1 Cmo02g00410 376007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00410 608 MobiDBLite consensus disorder prediction 176 190 - -
Cmo02g00410 608 Pfam Protein kinase domain 364 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g00410 608 PRINTS Proline rich extensin signature 68 93 - -
Cmo02g00410 608 PRINTS Proline rich extensin signature 44 61 - -
Cmo02g00410 608 PRINTS Proline rich extensin signature 3 24 - -
Cmo02g00410 608 PRINTS Proline rich extensin signature 24 40 - -
Cmo02g00410 608 MobiDBLite consensus disorder prediction 1 22 - -
Cmo02g00410 608 MobiDBLite consensus disorder prediction 525 550 - -
Cmo02g00410 608 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK5 362 576 - -
Cmo02g00410 608 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK5 7 362 - -
Cmo02g00410 608 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 362 576 - -
Cmo02g00410 608 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 7 362 - -
Cmo02g00410 608 SUPERFAMILY Protein kinase-like (PK-like) 275 518 IPR011009 -
Cmo02g00410 608 MobiDBLite consensus disorder prediction 1 123 - -
Cmo02g00410 608 Gene3D Transferase(Phosphotransferase) domain 1 365 532 - -
Cmo02g00410 608 MobiDBLite consensus disorder prediction 534 550 - -
Cmo02g00410 608 MobiDBLite consensus disorder prediction 157 278 - -
Cmo02g00410 608 MobiDBLite consensus disorder prediction 568 608 - -
Cmo02g00410 608 ProSiteProfiles Protein kinase domain profile. 300 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g00410 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 365 377 IPR008271 GO:0004672|GO:0006468
Cmo02g00410 608 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
Cmo02g00410 608 Gene3D Phosphorylase Kinase; domain 1 278 364 - -
Cmo02g00410 608 Pfam Protein tyrosine and serine/threonine kinase 305 361 IPR001245 GO:0004672|GO:0006468
Cmo02g00410 608 MobiDBLite consensus disorder prediction 240 256 - -
Cmo02g00410 608 MobiDBLite consensus disorder prediction 100 123 - -
Cmo02g00410 608 MobiDBLite consensus disorder prediction 570 608 - -
Cmo02g00410 608 MobiDBLite consensus disorder prediction 23 99 - -
Cmo02g00410 608 SMART serkin_6 300 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00410 Cmo20g00866 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00410 Cmo-Chr2:2119774 Cmo12g01280 Cmo-Chr12:11331888 7.32E-142 dispersed
Cmo02g00410 Cmo-Chr2:2119774 Cmo20g00866 Cmo-Chr20:4382714 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74091 PF00069 Pkinase 6.40E-23 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00410 - - mnt:21409551 442.58