Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00444 ATGGCTCCAAACACTCCCATTACCCTCTCTTTTCTCTTCCTAATTCTTCCATTCTTCTTCTTCGATCAATCTATCTCGACTAACACCGAGCTAAGATATGATTTTTACGACGAGTCGTGCCCTCATTTGCCTATGATAATTCGAGATCATATTTGGGAGGCGGTACAAAATGACACGAGAATTGCTGCATCGCTACTACGGTTGCAGTTCCATGATTGTATTGTAGACGGATGTGATGCATCGGTGCTGCTTGATGATACTAAAGACATGAAAGGTGAGAAAAATGCTCCGGGCAATGTGAAATCGCTACGAGGGTTTGAAGTGATCGATGCCATAAAAGCAGATGTTGAAGCATATTGTCCCGAGACAGTTTCTTGTGTTGATATATTAGGTCTTGCAACTAGAGAAGCTGTGTATCTGGTCGAAGGGCCATCTTGGGGCCTTCCACTAGGACGTAGAGATGGCTTAAAAGCAGACTTCAAATCCGTTCAAGAACAACTCCCATCTCCGAGGGCATCTCTAGAGAATAACACCGCCAAGTTCACCTCAAAGGGCCTCGATTTAAAGGACCTCGTCGTGCTATCAGGCGCACACACTATCGGCTTCGCTCGTTGCGTGACATTCAAGGTCCGCCTCTTCAACTACAAGGGCTCCGGCCAGCCCGACCCTGACATCAACGCAGCCATGCTCTCGGACTTGCAATCCATGTGCCCCAACAGAAACGACGGCACCAACGCCAATTTGGCCCCTCTGGATGTGGCCACTGTTGACAGGTTCGACAATGAGTATTACACGAACTTGATTAGTGGCGTGGGGCTTTTGGAGTCCGACCATGGTCTAATGGCCGACAGCAACACAGCTCAAATGGTTAGACAATATAGTTTTGATACGAACTTGTTTTATGATGACTTTGCTGAGTCGATGTTTAGGTTGAACATGGTTGGGGTTTTGAGTGGCCGTGACGGGCAGATTCGAAAGAATTGTCACGTTGTTAAAGTCGATGATGGGTATTAA 1014 46.94 MAPNTPITLSFLFLILPFFFFDQSISTNTELRYDFYDESCPHLPMIIRDHIWEAVQNDTRIAASLLRLQFHDCIVDGCDASVLLDDTKDMKGEKNAPGNVKSLRGFEVIDAIKADVEAYCPETVSCVDILGLATREAVYLVEGPSWGLPLGRRDGLKADFKSVQEQLPSPRASLENNTAKFTSKGLDLKDLVVLSGAHTIGFARCVTFKVRLFNYKGSGQPDPDINAAMLSDLQSMCPNRNDGTNANLAPLDVATVDRFDNEYYTNLISGVGLLESDHGLMADSNTAQMVRQYSFDTNLFYDDFAESMFRLNMVGVLSGRDGQIRKNCHVVKVDDGY 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2332209 2334956 + CmoCh02G004440.1 Cmo02g00444 376041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00444 337 Pfam Peroxidase 48 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00444 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Cmo02g00444 337 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Cmo02g00444 337 PANTHER PEROXIDASE 10 18 331 - -
Cmo02g00444 337 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00444 337 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00444 337 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00444 337 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00444 337 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00444 337 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00444 337 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00444 337 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00444 337 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00444 337 SUPERFAMILY Heme-dependent peroxidases 31 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo02g00444 337 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00444 337 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00444 337 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00444 337 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00444 337 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00444 337 CDD secretory_peroxidase 30 331 IPR033905 GO:0004601|GO:0042744
Cmo02g00444 337 PANTHER PEROXIDASE 72-RELATED 18 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00444 337 Gene3D - 34 331 - -
Cmo02g00444 337 ProSiteProfiles Plant heme peroxidase family profile. 30 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00444 337 Gene3D Peroxidase, domain 2 168 311 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00444 Cmo-Chr2:2332209 Cmo02g00465 Cmo-Chr2:2484099 0 dispersed
Cmo02g00444 Cmo-Chr2:2332209 Cmo20g00342 Cmo-Chr20:1675436 1.72E-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00444 K00430 - csv:101209504 530.02