Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00465 ATGGCTCCAAAAACTCCCATTAGCCTCTCTTTTCTCTTCCTAATTCTTCCCATTTTCTTCTTCATTCAAGCTCTCTCTGCCCCTAATTATAATTATAACTATCAGAAAGCTTACAATGAGCTCAGTTATGATTTTTATGACAAATCGTGCCCTCGTTTGCCATCGATAATTCGATATCGTGTTTGGGCTGCCGTACAAAACGACTCTAGAATTGCTGCATCACTACTACGATTGCAATTCCATGATTGTATTGTAGACGGATGTGAAGCATCGGTGATGCTTGATGATACTAAAGACATGAAAGGTGAGAAAAATGCTCCGGGAAATGTGAAATCGCTACGAGGGTTTGAAGTGATCGATGACATTAAAATGGATGTCGAAACATATTGTCCCGAGACAGTTTCATGTGTTGATATATTAGGTCTTGCAGCTAGAGAAGCTGTGTATCTGCTCCCATCGCCCAAGGCATCTCTAGAGAACAACACAGCCAAGTTCACCTCAAAGGGCCTCGATTTAAAGGACCTCGTGGTGCTATCAGGCGCACACACTATCGGCTTCGCTCGTTGCGTGACATTCAAGGTCCGCCTCTTCAACTACAAGGGCTCCGGCCAGCCCGACCCCGACATCAACGCAGCCATGCTCTCGGACTTGCAATCCATGTGCCCCAACAGAAACGACGGCACCAACGCCAATTTAGCCCCACTGGATGTGGTCACTGTTGACAGGTTCGACAATGAGTATTACACGAACTTGATTAGTGGCGTGGGGCTTTTGGAGTCGGACCATAGTCTTATGGCCGACAGCTACGCAGCTCATATGGTGAGACAATACAGTTATGATACGAATTTGTTCTATGATGACTTTGCTGAGTCGATGTTGAGGATGAGCTTGGTTGGGGTTTTGAGTGGGCGTGATGGGCAGATTCGAAAGAATTGTCATGTTGTTAATGTTGATGATGGGTATTGA 966 45.55 MAPKTPISLSFLFLILPIFFFIQALSAPNYNYNYQKAYNELSYDFYDKSCPRLPSIIRYRVWAAVQNDSRIAASLLRLQFHDCIVDGCEASVMLDDTKDMKGEKNAPGNVKSLRGFEVIDDIKMDVETYCPETVSCVDILGLAAREAVYLLPSPKASLENNTAKFTSKGLDLKDLVVLSGAHTIGFARCVTFKVRLFNYKGSGQPDPDINAAMLSDLQSMCPNRNDGTNANLAPLDVVTVDRFDNEYYTNLISGVGLLESDHSLMADSYAAHMVRQYSYDTNLFYDDFAESMLRMSLVGVLSGRDGQIRKNCHVVNVDDGY 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2484099 2485677 - CmoCh02G004650.1 Cmo02g00465 376062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00465 321 PANTHER PEROXIDASE 72-RELATED 28 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00465 321 PANTHER PEROXIDASE 72-RELATED 151 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00465 321 ProSitePatterns Peroxidases active site signature. 72 83 IPR019794 GO:0004601
Cmo02g00465 321 Gene3D - 151 316 - -
Cmo02g00465 321 Gene3D Peroxidase, domain 2 152 295 - -
Cmo02g00465 321 CDD secretory_peroxidase 40 315 IPR033905 GO:0004601|GO:0042744
Cmo02g00465 321 SUPERFAMILY Heme-dependent peroxidases 40 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo02g00465 321 PRINTS Haem peroxidase superfamily signature 72 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00465 321 PRINTS Haem peroxidase superfamily signature 174 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00465 321 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00465 321 Gene3D - 44 150 - -
Cmo02g00465 321 PRINTS Plant peroxidase signature 114 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00465 321 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00465 321 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00465 321 PRINTS Plant peroxidase signature 50 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00465 321 PRINTS Plant peroxidase signature 74 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00465 321 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00465 321 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00465 321 Pfam Peroxidase 151 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00465 321 Pfam Peroxidase 59 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00465 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 174 184 IPR019793 -
Cmo02g00465 321 PANTHER PEROXIDASE 10 151 315 - -
Cmo02g00465 321 PANTHER PEROXIDASE 10 28 150 - -
Cmo02g00465 321 ProSiteProfiles Plant heme peroxidase family profile. 40 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00444 Cmo-Chr2:2332209 Cmo02g00465 Cmo-Chr2:2484099 0 dispersed
Cmo02g00465 Cmo-Chr2:2484099 Cmo03g01001 Cmo-Chr3:7539228 3.81E-112 dispersed
Cmo02g00465 Cmo-Chr2:2484099 Cmo04g00821 Cmo-Chr4:4084751 4.78E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00465 K00430 - csv:101209504 468.774