Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g00477 | ATGGACACTCTCTTTGTCCCCATCACCTTCTCCAAACCTATTCATTCTTTACTCACCCGCACCACCAACGCCGGAGCTCGATCCAGGATCGGACCTGTTTCCTGCTTCTCCCTGCGTTCTTCTGTAATTCGGCTCAAGCGCTTCCGTTGCGCTGCCGATGCCTCCGATCACCGGCACGGCCACCACCACCACCACCATAGCTGTCAGCACCATTGCGGTGGTGACGGTGATGGAGTGGAGCTGACTGGAGCTCAGAAGGCGTTTGTTCGATTTGCCGAAGCTATTAGGTGGACGGACTTGGCGAATTATTTGCGGGAGCATCTACACTTATGTTGCGGTTCTGCTGCTTTGTTTATCACTGCGGCTGCATGTCCTTATTTGGTGCCTAAACCTGCTGTGAAGCTTCTACAGAATGTTTTCATTGCTGTTGCTTTCCCTTTAGTCGGGGTCTCTGCTTCTCTTGATGCTCTTACTGATATAAGTGGTGGGAAAGTAAACATCCATGTACTAATGGCCCTTGCAGCCTTTGCATCAATATTTATGGGGAACCCCTTGGAGGGAGGACTACTTCTTGTGATGTTTAATCTGGCTCATATTGCTGAAGAGTATTTCACAAAGCAATCAATGACTGACGTTAAAGAGTTGAAGGAAAGTCATCCAGATTTTGCCCTTGTTCTGGATATGAATGATGATAACCTTCCTGATACTTCAGATCTGGAGCATCGAAAGGTGCCCGTGCGTGATATTGAAGTGGGCTCATATATCATGGTGGGAGCTGGTGAGTCTGTCCCCGTAGATTGTGAGGTTTATCATGGTTGTGCTACGATCACTGTTGAGCACTTAACAGGAGAAATCAAACCATTGCAAATAAAGGTTGGGCAAAGAGTACCAGGTGGAGCAAGAAATTTGGACGGTAGGATCATAGTGAAGGCTACAAAAACATGGGAAGAGTCAACACTTAGCAGGATTGTGCAGTTGACTGAAGAAGCACAACTTAATAAACCAAAACTACAGAGGTGGCTTGATGAATTTGGTGAGAATTACAGCAAAGTGGTTGTAGTTTTATCTGTGGCTGTTGCCCTCATTGGACCATTATTATTCAAGTGGCCCTTTATTTGCACACCAGGTTTCAGAGGATCAGTTTATAGAGCGCTTGGGTTCATGGTAGCCGCATCACCATGTGCACTGGCTGCAGCTCCATTGGCATACGCTATTGCAATAAGTTCATGTGCAAGAAAGGGTATACTTCTGAAAGGTGGACATGTGCTTGATGCTATGGCTTCTTGTGACACCGTTGCATTTGATAAAACCGGGACATTGACTACAGGAGGACTTGTATTTAAAGCCATAGAACCCATTTATGGGCATAAGATTGGAGGCGATAATTCACATTTGGCTTCCTGTTGCATACCCAGCTGTGAAAAAGAAGCCCTTGCTGTTGCAGCTGCCATGGAAAAGGGTACTACTCACCCAATTGGAAGAGCTGTTGTAGATCATAGTGTGGGGAAAAACCTTCCTTCTATTTCTGTTGAAAGTTTCGAATATTTCCCTGGAAGAGGTCTCATCGCAACTTTGCATGGCATTAAGTCAGGAATTGGAGGTCCATTGCGGAAAGCATCCCTTGGTTCTGTGGATTTCATCACTTCCTTTTGCAAGTCCGAAAACGAATCAAGGAAGATCAAGGAAGCTGTTCGAGCATCATCATATGGAAGCGAATTTGTTCATGCTGCTCTTTCAGTTGATCAGAAGGTAACACTGATTCACCTCGAGGATCAGCCTCGAGCTGGCGTCTTAGATGCAATAGCAGAACTACAAGATCAGGCAAAACTCCGTGTTATGATGTTAACTGGTGATCATGATTCAAGTGCATGGAAAATTGCAAATGCTGTGGGAATAGATGAAGTTTACTACAGTCTTAAGCCTGAGGATAAACTTGCTCATGTGAAGGAAATTTCGAGGGAGAAGGGTGGTGGTCTGATCATGGTAGGCGAGGGTATAAACGATGCACCTGCACTTGCTGCAGCTACTGTAGGAATAGTTCTTGCCTGTCGTGCAAGCGCGACTGCTACAGCTGTCGCGGATGTCCTTCTTCTTCAAGATAGTATTTCCGGTGTTCCATTCTGTATTGCCAAATCTCGTCAGACGACTGCGCTGGTCAAGCAAAATGTTACCCTTGCCTTGTCGTCTATCCTTTTAGCCTCTCTCCCATCCATTTTGGGGTTTCTTCCCTTGTGGCTAACGGTCCTTCTACACGAGGGTGGTACTCTCCTGGTTTGCCTGAACTCCATTCGTGCTCTAAATCATCCCTCATGGTCATGGAAGCAAGATTTTCAAAATCTGATCCACAACGCCAGATCTAGTCTGCACACCACGCCCGAACCTAGCTCAGGTACCATCCGAACTGCATCATCATAA | 2415 | 46.21 | MDTLFVPITFSKPIHSLLTRTTNAGARSRIGPVSCFSLRSSVIRLKRFRCAADASDHRHGHHHHHHSCQHHCGGDGDGVELTGAQKAFVRFAEAIRWTDLANYLREHLHLCCGSAALFITAAACPYLVPKPAVKLLQNVFIAVAFPLVGVSASLDALTDISGGKVNIHVLMALAAFASIFMGNPLEGGLLLVMFNLAHIAEEYFTKQSMTDVKELKESHPDFALVLDMNDDNLPDTSDLEHRKVPVRDIEVGSYIMVGAGESVPVDCEVYHGCATITVEHLTGEIKPLQIKVGQRVPGGARNLDGRIIVKATKTWEESTLSRIVQLTEEAQLNKPKLQRWLDEFGENYSKVVVVLSVAVALIGPLLFKWPFICTPGFRGSVYRALGFMVAASPCALAAAPLAYAIAISSCARKGILLKGGHVLDAMASCDTVAFDKTGTLTTGGLVFKAIEPIYGHKIGGDNSHLASCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSVGKNLPSISVESFEYFPGRGLIATLHGIKSGIGGPLRKASLGSVDFITSFCKSENESRKIKEAVRASSYGSEFVHAALSVDQKVTLIHLEDQPRAGVLDAIAELQDQAKLRVMMLTGDHDSSAWKIANAVGIDEVYYSLKPEDKLAHVKEISREKGGGLIMVGEGINDAPALAAATVGIVLACRASATATAVADVLLLQDSISGVPFCIAKSRQTTALVKQNVTLALSSILLASLPSILGFLPLWLTVLLHEGGTLLVCLNSIRALNHPSWSWKQDFQNLIHNARSSLHTTPEPSSGTIRTASS | 804 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2601591 | 2611671 | + | CmoCh02G004770.1 | Cmo02g00477 | 376074 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g00477 | 804 | SFLD | C1.7: P-type atpase like | 415 | 715 | - | - | |
Cmo02g00477 | 804 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 435 | 441 | IPR018303 | - | |
Cmo02g00477 | 804 | TIGRFAM | ATPase-IB_hvy: heavy metal translocating P-type ATPase | 167 | 764 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Cmo02g00477 | 804 | SUPERFAMILY | HAD-like | 431 | 762 | IPR036412 | - | |
Cmo02g00477 | 804 | PRINTS | P-type cation-transporting ATPase superfamily signature | 433 | 447 | - | - | |
Cmo02g00477 | 804 | PRINTS | P-type cation-transporting ATPase superfamily signature | 585 | 596 | - | - | |
Cmo02g00477 | 804 | PRINTS | P-type cation-transporting ATPase superfamily signature | 608 | 618 | - | - | |
Cmo02g00477 | 804 | PRINTS | P-type cation-transporting ATPase superfamily signature | 662 | 681 | - | - | |
Cmo02g00477 | 804 | PRINTS | P-type cation-transporting ATPase superfamily signature | 686 | 698 | - | - | |
Cmo02g00477 | 804 | SUPERFAMILY | Calcium ATPase, transduction domain A | 241 | 326 | IPR008250 | - | |
Cmo02g00477 | 804 | SFLD | p-type atpase | 415 | 715 | IPR044492 | - | |
Cmo02g00477 | 804 | Pfam | haloacid dehalogenase-like hydrolase | 430 | 675 | - | - | |
Cmo02g00477 | 804 | Gene3D | - | 205 | 331 | - | - | |
Cmo02g00477 | 804 | PANTHER | PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 | 27 | 789 | - | - | |
Cmo02g00477 | 804 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 169 | 746 | IPR023298 | - | |
Cmo02g00477 | 804 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 563 | 742 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo02g00477 | 804 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 241 | 454 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo02g00477 | 804 | Gene3D | - | 444 | 593 | IPR023299 | GO:0000166 | |
Cmo02g00477 | 804 | Gene3D | - | 426 | 713 | IPR023214 | - | |
Cmo02g00477 | 804 | Pfam | E1-E2 ATPase | 240 | 413 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00477 | Cmo-Chr2:2601591 | Cmo02g00508 | Cmo-Chr2:2797137 | 0 | dispersed | |
Cmo02g00477 | Cmo-Chr2:2601591 | Cmo05g00742 | Cmo-Chr5:3902126 | 3.11E-62 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g00477 | K01534 | - | csv:101221102 | 1377.84 |