Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00506 ATGAGCTGCCATTGGAGCTGCAGAGTTCTTGCTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCAATGTTGTTGTGATGGCTTGAATTCTGATGGAGTTTTCTTGCTTTCCTTTAAGTATGGCGTTTTGGACGACCCTCTTTTTGTGCTTCAGAACTGGAATTACTCCGATGACACGCCGTGTTCTTGGCGGGGTGTCACCTGCGGCGGTGATGGTGCTACGGTTACAGCTTTATCGCTACCGGATTCTCTGCTTATGGGCTCTGTTTCTTCTGATCTGGGTTTGATTCAAAGCCTTCAATTTGTTGATCTTTCGAACAATTCCTTTAATGGGTCTCTCCCTTTGTCTCTGTTCAACAATTCCATGCTTCGGTTTCTTGATTTGTCGGAGAATTTGATTTCCGATGAGGTTCCGGCGGCGGTGAGTCGACTTGGGAATCTGCAAGTTCTTAACCTCTCCGGCAATGCTCTGTTCGGGGAGTTTCCGAGCGATCTTGCGAATTTGGGTAATCTCACGGTTATATCTCTTAAGAACAATTACATTTCCGGGGAACTTCCTGGTCGGTTCCGAACGGTTGAGGTTTTAGATCTGTCTTCTAATTTGATTAATGGGTCTTTGCCGTTCGATTTTGGTGGCGACAGTTTACGTTACTTCAACATCTCGTATAATAGACTTTCCGGCGAAATCCCGCCGGATTTCGCCCACAAAATCCCAGCCAACGCCACGATTGATCTCTCATTCAACAATTTCACCGGTGAAGTCCCTGTTTCCGACGTGTTCATGAACCAAGAAGCAAACTCCTTCGCCGGAAACCGCCAACTCTGCGGCGAGATAACGAAAACTGCATGCCCAATTCCTTCGTCGCCGGCGTCTCTCCCACCGGCAATCGCCGCCATGCCAATTGACCCAAGTACCCCAGAAACCACCTCGCCGGAAAAAGAGAGCGGAACAGGGCTAAAATCCTCAACTATAGTCGCGATTGTACTCGGCGACGTCGTCGGATTAGCAATTCTGTGCCTCCTCTTCTTCTATGTCTACCACTTGAAGAAAAAAAACAAAACCGACGAAACCCATTTGAAAAACGAATCCAATTTGGCGAAAGACAGCTGGTCCACATCTTCATCGGAATCCAGAGGATTTTCGCGATGGTCCTGCCTGAGAAAAAAAGAGTATCCAGAAGAGGGAAATTCCGAGCAGGTTAGTATCGGTTCCATCTCCGGCCGCCGCGACACAACGGAGGAGGGCGGGGAAGGGAACAAAAGGGGAACTTTAGTGACAGTAGACGGCGGAGAGAAAGAGTTGGAACTTGAGACACTATTGAAAGCGTCGGCGTACATTCTCGGCGCTACCGGATCGAGCATAACGTACAAGGCAGTGCTGGAAGATGGCACTGCATTTGCAGTGCGGAGAATCGGCGACGGCGGAGTTGAAAAGTATAAGGATTTCGAGAATCAGATTAGAGTTGTAGCTAAATTGGTTCATCCAAATTTGGTTCGTGTTCGTGGGTTCTACTGGGGCGTTGATGAGAAGCTCATCATTTATGAATTCGTTCCCAATGGTAGCCTTGCCAATGCCCGTCACAGGAAAGTGGGCTCTTCACCTTGTCATCTTCCATGGGAGGCCCGATTGAGAATAGCAAAAGGAGTAGCCCGTGGCCTTTCTTATCTCCATGACAAGAAGCACGTCCATGCCAACTTAAGACCTAGCAACATTCTTTTGGGCTACAATATGGAGCCCAAGATAGGCGACTTCGGTCTCGAGAAGGTTTTATTTGGCGATTCAACTTACAAAACGGGTAGCTCGACTCGAAATTTTGGAAGTAAGAGGTCAACTGCATCTCGTGATAGCTTCCAAGACTTCGTTACTGGACCTAGCCCTGGACCGAGTCCAAGTCCTAGCTCGATCAGTGGAGTGTCACCATACCTAGCACCAGAATCGCTTCGAAGCTTAAAACCTACTCCAAAGTGGGATGTGTACTCTTTTGGAGTGATACTACTCGAGCTACTAACTGGAAAGATCATTGTATTGGATGAGTTGGGTCAAGGGCTTGAGCTTGCAGTCGACGATAAAAGTCGAGCTTTAAGAATGGCTGACATGGCAATTCGAGCTGACGTGGAGGGGAGAGAAGATGCATTATTATCATTCTTTAAATTAGGTTATACTTGTGCATCTCCAACCCCACAAAAGAGACCATCCATGAAGGAAGCCCTACAAGTTTTGGAGAAATTTCCAACTATATCCACGTCATCACACTATTATGGTCTCTAG 2268 47.35 MSCHWSCRVLALLLLLLLLLLQCCCDGLNSDGVFLLSFKYGVLDDPLFVLQNWNYSDDTPCSWRGVTCGGDGATVTALSLPDSLLMGSVSSDLGLIQSLQFVDLSNNSFNGSLPLSLFNNSMLRFLDLSENLISDEVPAAVSRLGNLQVLNLSGNALFGEFPSDLANLGNLTVISLKNNYISGELPGRFRTVEVLDLSSNLINGSLPFDFGGDSLRYFNISYNRLSGEIPPDFAHKIPANATIDLSFNNFTGEVPVSDVFMNQEANSFAGNRQLCGEITKTACPIPSSPASLPPAIAAMPIDPSTPETTSPEKESGTGLKSSTIVAIVLGDVVGLAILCLLFFYVYHLKKKNKTDETHLKNESNLAKDSWSTSSSESRGFSRWSCLRKKEYPEEGNSEQVSIGSISGRRDTTEEGGEGNKRGTLVTVDGGEKELELETLLKASAYILGATGSSITYKAVLEDGTAFAVRRIGDGGVEKYKDFENQIRVVAKLVHPNLVRVRGFYWGVDEKLIIYEFVPNGSLANARHRKVGSSPCHLPWEARLRIAKGVARGLSYLHDKKHVHANLRPSNILLGYNMEPKIGDFGLEKVLFGDSTYKTGSSTRNFGSKRSTASRDSFQDFVTGPSPGPSPSPSSISGVSPYLAPESLRSLKPTPKWDVYSFGVILLELLTGKIIVLDELGQGLELAVDDKSRALRMADMAIRADVEGREDALLSFFKLGYTCASPTPQKRPSMKEALQVLEKFPTISTSSHYYGL 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2768658 2771518 - CmoCh02G005060.1 Cmo02g00506 376103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00506 755 MobiDBLite consensus disorder prediction 600 624 - -
Cmo02g00506 755 SUPERFAMILY Protein kinase-like (PK-like) 446 741 IPR011009 -
Cmo02g00506 755 ProSiteProfiles Protein kinase domain profile. 441 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g00506 755 MobiDBLite consensus disorder prediction 303 317 - -
Cmo02g00506 755 SUPERFAMILY L domain-like 33 276 - -
Cmo02g00506 755 Gene3D Phosphorylase Kinase; domain 1 418 516 - -
Cmo02g00506 755 MobiDBLite consensus disorder prediction 600 638 - -
Cmo02g00506 755 PANTHER BNAC07G16060D PROTEIN 9 745 - -
Cmo02g00506 755 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 745 - -
Cmo02g00506 755 Pfam Protein kinase domain 447 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g00506 755 MobiDBLite consensus disorder prediction 294 317 - -
Cmo02g00506 755 Gene3D Transferase(Phosphotransferase) domain 1 517 751 - -
Cmo02g00506 755 MobiDBLite consensus disorder prediction 394 424 - -
Cmo02g00506 755 Pfam Leucine Rich Repeat 214 234 IPR001611 GO:0005515
Cmo02g00506 755 Pfam Leucine Rich Repeat 146 168 IPR001611 GO:0005515
Cmo02g00506 755 CDD STKc_IRAK 447 743 - -
Cmo02g00506 755 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Cmo02g00506 755 Gene3D Ribonuclease Inhibitor 28 190 IPR032675 -
Cmo02g00506 755 Gene3D Ribonuclease Inhibitor 191 285 IPR032675 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00506 Cmo20g00981 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00506 Cmo-Chr2:2768658 Cmo04g00508 Cmo-Chr4:2523908 0 dispersed
Cmo02g00506 Cmo-Chr2:2768658 Cmo20g00981 Cmo-Chr20:5488146 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74095 PF00069 Pkinase 1.20E-31 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00506 - - bhj:120088533 1215.68