Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g00543 | ATGAGAGCTCATCGTTTGAGCTTCTTCATTTTCTCTCTCTCATTATTCACTTCATTCATCGGAGCCTTCCCGCTTCTTCGCGATTCTGCCATTTCAACTAGGAGGATTCTGCATCAGCCTCTCTTTCCGATAGGCTCTGAGCCGCCGCCGGATATTGAGTTAACCCCGCCGCCGCCTCCTGACTCTCCCTCCGACGTTCCGCCGTTTTTCCATGACCCGCCGACCACTCAAGATCAGACTCAACCGCCTCCTCCGTCTACCAATGGAACTATGCCTATCCCTGCTGCTACGGCGCAACAATCCAAGCCGACGAAGACCGTTGCGATTGCAATTTCGGTTGGGATTGTGACTTTGGGGATGCTCTCTGCTCTGGCGTTTTTTCTGTATCGTCACCGGGCGAAGCATCCGGGGGAGTCGCAGAAGCTTGTTGGAGGGAGTAATCCGGAGAGATTTCCGGAGGATTCGCGTGCGCCGCCGTCGAGTTTTTTCTATATTGGGACTGTGGAGCCGAGCCAGAGCTCTGTTGTTGAGCAGAATGGTGCTAATGGTGCTAATAGTTCGCCTTATCGCAAGCTGAATTCGATTAAGATGTCGGATCGGTACCGGCCGAGTCCGGAATTGCAGCCGCTGCCGCCTCTGCCGAAGCCGCCTATGGCTATGTCGCCTCCCGCTCTGTCGTCTTCGGATGATGAAAGCCAGAATACGGCATTCCATACTCCACAATGCTCGTCAATTGTTAGTCATGATGATGGCTATTTCTCACCGGCTTCTCGTCGAAGTAATTCTGTTAAGAGCTGTTCTACGGCAAGTTTTAAGAATGACCATATGAATTCCAATGCTCCTCCTATTCCTCATTCTAAAAGAACCTCTCCGAAATCTAGATTCTCGGTTTCTTCGACCAAGCGCAATACGTCTCAGCCTCAGCCACCACCGCCGCCGCCTCCACCGCGTCCGCTTGATGACCTTCGTGAAATTCCGAATTCGAAAGAAACAATGCCTTTCTCTTCCACGAGACCTAAATTTTCGAAGCCTCCGCCTCCACCAAATTTGGCGCTTCTTCAAACAATTAGCAATTCCGCCACATATCCTCAAATTCAGAAAACTGCTGCACCTCCACCTCCACCTCCGCCTCCGCCTCCGCCTCCACCGCCACCTCCACGACCACCGCCGCATCCGGTTTCGTATTCAACGCCACAAAAACTAGGGTTATCGGAAACCAGAATGGGTCCAGTCACTCCTCCAGATTCCTCCAAGTCACAATCCTATTCAACAGCGAGAACAAACTCATCGTCCAAATCCACACCGACATCTGCACCAGCAAATTCCGCTAACGAAGATGTTGTCGAAAGGATTAATTCGATGGAAAGGCTTGAATACGAAGATACAGAAGGTTCAAAACCGAGATTGAAGCCCTTGCACTGGGACAAAGTACGGGCAACCTCAGACCGAGCTACAGTATGGGATCAACTCAAATCAAGCTCATTCCAATTAAACGAGGACATGATGGAAACACTTTTTGGCTTCAATTCTGCAAATTCTGTTCCCAAAGAGGCCACGAGAAAGTCTGTTCTTCCCCCCGTTGAGAAGGAAAATAGGGTATTGGATCCCAAAAAGTCGCAGAACATTGCAATACTCCTAAGAGCTCTTAATGTCACGCGTGATGAAGTGATCGAAGCTCTTCAAGATGGTAACCCGGAAGGGTTTGGTACCGAGCTTTTAGAAACGCTAGTGAAGATGGCTCCAACCAAAGAAGAAGAGATAAAACTGAGAGAGTACTGTGGTGATGGTTCAAAATTAGGGACTGCAGAAAGATTTCTGAAGGCAGTGCTTGAAGTCCCATTTGCCTTTAGAAGAGTTGAGGCCATGCTGTACAGAGCCAATTTTGATTCAGAAGTGAAGTATCTAAGGAAGTCATTTCAAACGCTTGAGGTTGCAAGTGAGGAATTAAAGAACAGTAGACTTTTTCTTAAACTCCTTGAAGCAGTTCTTAAGACGGGAAATAGGATGAATGTCGGTACAAATCGTGGTGATGCTAAATCCTTTAAGCTTGAGACCCTCTTAAAATTAGTAGATATAAAGGGAACGGATGGAAAGACAACATTGCTTCATTTTGTTGTTCAAGAAATTATCAGATCAGAAGGTGGTGCTGATTCAACTAGTGACAACCTTCAACCCCGTTCGCAATCGAAAATCGAGGATGAATTTAGAAAGCAGGGCTTGCAGGTTGTGGCTGGACTGAGCAGAGACCTTAGCAATGTGAAAAAAGCAGCTGGTATGGACTCGGACGTCTTGAGCAGCTATGTCACAAAGCTCGAAATGGGGCTTGAAAAAGTAAGGATGGTTTTGCAATTCGAAAAGCCAGGAATGCATGGAAAGTTCTTCGACTCGATGAAAACATTCTTGAAGGAGGCAGAAGAAGAAATAGTTAGGATCAAGGACGACGAAAGGAAAGCTTTATCTCTGGTGAAAGCGGTCACAGAGTATTTCCATGGTGACGCTGCCAAGGAGGAAGCTCATCCATTCCGAATCTTCATGATCGTTCGGGATTTCCTAACCATACTAGATCAAGTATGCAAAGAAGTTGGGAGAATGCAGGATGGGGTAATGGTGGGTGCTGCAAGATCCTTTCGGATATCGGCAACAGCCTCCCTCCCAGTCCTCAGCAGGTACAACATCAAACACGACCGAAGTTCCGACGAGGATAGCTCATCTCCGTAA | 2718 | 47.83 | MRAHRLSFFIFSLSLFTSFIGAFPLLRDSAISTRRILHQPLFPIGSEPPPDIELTPPPPPDSPSDVPPFFHDPPTTQDQTQPPPPSTNGTMPIPAATAQQSKPTKTVAIAISVGIVTLGMLSALAFFLYRHRAKHPGESQKLVGGSNPERFPEDSRAPPSSFFYIGTVEPSQSSVVEQNGANGANSSPYRKLNSIKMSDRYRPSPELQPLPPLPKPPMAMSPPALSSSDDESQNTAFHTPQCSSIVSHDDGYFSPASRRSNSVKSCSTASFKNDHMNSNAPPIPHSKRTSPKSRFSVSSTKRNTSQPQPPPPPPPPRPLDDLREIPNSKETMPFSSTRPKFSKPPPPPNLALLQTISNSATYPQIQKTAAPPPPPPPPPPPPPPPPRPPPHPVSYSTPQKLGLSETRMGPVTPPDSSKSQSYSTARTNSSSKSTPTSAPANSANEDVVERINSMERLEYEDTEGSKPRLKPLHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGFNSANSVPKEATRKSVLPPVEKENRVLDPKKSQNIAILLRALNVTRDEVIEALQDGNPEGFGTELLETLVKMAPTKEEEIKLREYCGDGSKLGTAERFLKAVLEVPFAFRRVEAMLYRANFDSEVKYLRKSFQTLEVASEELKNSRLFLKLLEAVLKTGNRMNVGTNRGDAKSFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGGADSTSDNLQPRSQSKIEDEFRKQGLQVVAGLSRDLSNVKKAAGMDSDVLSSYVTKLEMGLEKVRMVLQFEKPGMHGKFFDSMKTFLKEAEEEIVRIKDDERKALSLVKAVTEYFHGDAAKEEAHPFRIFMIVRDFLTILDQVCKEVGRMQDGVMVGAARSFRISATASLPVLSRYNIKHDRSSDEDSSSP | 905 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3081604 | 3085556 | - | CmoCh02G005430.1 | Cmo02g00543 | 376140 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g00543 | 905 | Coils | Coil | 801 | 821 | - | - | |
Cmo02g00543 | 905 | MobiDBLite | consensus disorder prediction | 200 | 447 | - | - | |
Cmo02g00543 | 905 | MobiDBLite | consensus disorder prediction | 205 | 221 | - | - | |
Cmo02g00543 | 905 | MobiDBLite | consensus disorder prediction | 305 | 321 | - | - | |
Cmo02g00543 | 905 | PANTHER | FORMIN-RELATED | 13 | 905 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
Cmo02g00543 | 905 | PANTHER | FORMIN-LIKE PROTEIN 6 | 13 | 905 | - | - | |
Cmo02g00543 | 905 | MobiDBLite | consensus disorder prediction | 410 | 447 | - | - | |
Cmo02g00543 | 905 | MobiDBLite | consensus disorder prediction | 225 | 304 | - | - | |
Cmo02g00543 | 905 | MobiDBLite | consensus disorder prediction | 352 | 366 | - | - | |
Cmo02g00543 | 905 | SMART | it6_source | 459 | 869 | IPR015425 | - | |
Cmo02g00543 | 905 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 375 | 865 | - | - | |
Cmo02g00543 | 905 | MobiDBLite | consensus disorder prediction | 42 | 102 | - | - | |
Cmo02g00543 | 905 | Pfam | Formin Homology 2 Domain | 462 | 854 | IPR015425 | - | |
Cmo02g00543 | 905 | MobiDBLite | consensus disorder prediction | 137 | 158 | - | - | |
Cmo02g00543 | 905 | Gene3D | Formin, FH2 domain | 453 | 865 | IPR042201 | - | |
Cmo02g00543 | 905 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 459 | 880 | IPR015425 | - | |
Cmo02g00543 | 905 | MobiDBLite | consensus disorder prediction | 43 | 70 | - | - | |
Cmo02g00543 | 905 | MobiDBLite | consensus disorder prediction | 367 | 395 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g01208 | Cmo-Chr1:9769759 | Cmo02g00543 | Cmo-Chr2:3081604 | 3.91E-122 | dispersed | |
Cmo02g00150 | Cmo-Chr2:734161 | Cmo02g00543 | Cmo-Chr2:3081604 | 1.17E-110 | dispersed | |
Cmo02g00543 | Cmo-Chr2:3081604 | Cmo04g01984 | Cmo-Chr4:10269132 | 4.86E-173 | dispersed | |
Cmo02g00543 | Cmo-Chr2:3081604 | Cmo02g01705 | Cmo-Chr2:9770535 | 1.39E-164 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g00543 | - | - | cmo:103497354 | 1377.46 |