Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo02g00588 | ATGTCGGGCCAAACCCAGCGTTTGAATGTAGTTCCAACAGTAACAATGCTTGGAGCGATGAAAGCTCGTCTTATTGGTGCAACCAGAGGTCATGCTCTCCTCAAGAAGAAGAGTGATGCTTTGACTGTTCAGTTCCGTCAGATACTCAAGAAGATTGTCTCAGCTAAGGAGTCAATGGGAGAAGTCATGAAGACATCTTCATTTTCTCTTACCGAAGCGAAATATGTTGCTGGCGACAACATCAAGCATATCGTCCTTGAGAATGTCCAAAATGCAGCTATTAAGATTCGATCTCGGCAGGACAACATTGCTGGTGTAAAACTCCCGAAATTTGAACATTATTCGGATGGTGAGACCAAAAATGATCTCACAGGGCTAGCCAGGGGTGGACAACAGATCCAGCTATGTCGTGGCGCGTATGTGAAGGCAATTGAGGTTCTTGTTGAGCTTGCTTCACTTCAGACGTCATTTTTGACTCTTGACGAGGCAATTAAAACCACAAACCGCAGGGTTAACGCTCTAGAGAATGTGGTGAAGCCAAGGATAGAGAATACTATAAGTTACATCAAGGGAGAATTGGACGAGCTAGAAAGGGAGGATTTCTTTAGACTGAAAAAGATTCAGGGTTATAAGAGAAGGGAAATCGAGAGACAACGAGCCAACGCCAAGCTATATGCGGAGGAACAGCTTGCTGAGAAGGTGTCATTGCAGAAGGGCGTCTCCATAAGTTCAGCTTACAGTCTATTGTCTGCAGCTGGTGAGAAGGATGAGGATATTATATTTTGA | 786 | 44.4 | MSGQTQRLNVVPTVTMLGAMKARLIGATRGHALLKKKSDALTVQFRQILKKIVSAKESMGEVMKTSSFSLTEAKYVAGDNIKHIVLENVQNAAIKIRSRQDNIAGVKLPKFEHYSDGETKNDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRIENTISYIKGELDELEREDFFRLKKIQGYKRREIERQRANAKLYAEEQLAEKVSLQKGVSISSAYSLLSAAGEKDEDIIF | 261 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 3501711 | 3502496 | + | CmoCh02G005880.1 | Cmo02g00588 | 376185 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo02g00588 | 261 | PANTHER | V-TYPE ATP SYNTHASE SUBUNIT D | 1 | 261 | IPR002699 | GO:0046961 | |
| Cmo02g00588 | 261 | Gene3D | - | 1 | 198 | - | - | |
| Cmo02g00588 | 261 | Pfam | ATP synthase subunit D | 17 | 208 | IPR002699 | GO:0046961 | |
| Cmo02g00588 | 261 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT D-RELATED | 1 | 261 | - | - | |
| Cmo02g00588 | 261 | TIGRFAM | V_ATPase_subD: V-type ATPase, D subunit | 9 | 211 | IPR002699 | GO:0046961 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo02g00588 | Cmo-Chr2:3501711 | Cmo11g02028 | Cmo-Chr11:13824794 | 7.27E-177 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo02g00588 | K02149 | - | csv:101213101 | 477.633 |