Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g00591 | ATGGATGGATACACACCAATGATTCCAGGTGTATCTATAAATACCAGTTTGTTCATCAACACAAACAACCCAACCCACTTCACACACCCTCACCACATGGAACACAACAAGCCTTTGGCGGCGGCGATTCTCATTCAAACCATCTACGCCGCCATGTTTCTTCTCTCCAAGGCCGCTTTTGACGGCGGAATGAACAATTTCATCTTCACTTTCTACCGCCAAGCCTTCGCCACCATCTCTCTTTCTCCCATTACCTTCTTTTTCAAATGGAAAACTGCCCCACCCTTGACATTCTTCACCTTCTGCAAAATATTTTTGCTTTCGTTTGTCGGGATTGCTGTATCTTTAAATCTTTATGGGATTGCTCTTGTGTATACATCGGCAACGTTAGCGGCAGCCACGACGAATTGTCTCCCGGTTATAACGTTCTTCGTCGCGCTTTTACTTAGGCTTGAGGTGTTGAGATTAAAGTCAATAGCTGGAATAGCAAAGCTTGCAGGCATAGTTTTATGCGTCGGCGGTGTGGGGGTGTTGGCATTCTACAAAGGCCCACAACTCAAATGGTTCAATAATCATCACCTCTTTTCTGCCCACAACGCCGCCACCCACGCCCACTCTGCCACTGCCTCTTCCACCAGCTCATGGCTCAAGGGCTGCTTTTTGATGCTCTCTTCCAATACCCTTTGGGGCATTTGGATTGTTCTTCAGACATTTGTGCTGAAAAGCTATCCATCCAAGCTTGTGTTGACAAATCTTCAGTGTTTGTTGAGTTCATTTCAAACATTTGCTATTGCTATTGCAATGGAGAGAGACCCTAAAGAATGGAAATTGGGGTGGGATGTTAGGCTTCTTTCAGTGGCATATTGTGGTGTTGTGGTGACTGCTGTTACGTATTGCCTTCAAGCGTGGATTATTGAGAAGAAAGGCCCCGTTTTTCTTGCTATGTCTACGCCGTTTTCTCTAGTTATTACCACCGTCTGTTCCGCTATTCTTCTTGGCGACAATATCACTCTTGGAAGTGGTTTGGGCGGTATTTTATTGGTGGGAGGACTATATTTTGTGCTGTGGGGGAAGAGCAAAGAGCAAAAGATAAGTGAAGGGTTGAAAGAAGGTGGCAAAGAATGCAGCATGCAACAACACAAGGAGAATACAAAATTAGGAGATGAAAATTCAGCATCTCCCATTGAAAATGTCTAA | 1197 | 44.78 | MDGYTPMIPGVSINTSLFINTNNPTHFTHPHHMEHNKPLAAAILIQTIYAAMFLLSKAAFDGGMNNFIFTFYRQAFATISLSPITFFFKWKTAPPLTFFTFCKIFLLSFVGIAVSLNLYGIALVYTSATLAAATTNCLPVITFFVALLLRLEVLRLKSIAGIAKLAGIVLCVGGVGVLAFYKGPQLKWFNNHHLFSAHNAATHAHSATASSTSSWLKGCFLMLSSNTLWGIWIVLQTFVLKSYPSKLVLTNLQCLLSSFQTFAIAIAMERDPKEWKLGWDVRLLSVAYCGVVVTAVTYCLQAWIIEKKGPVFLAMSTPFSLVITTVCSAILLGDNITLGSGLGGILLVGGLYFVLWGKSKEQKISEGLKEGGKECSMQQHKENTKLGDENSASPIENV | 398 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3540127 | 3542339 | - | CmoCh02G005910.1 | Cmo02g00591 | 376188 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g00591 | 398 | Pfam | EamA-like transporter family | 217 | 355 | IPR000620 | GO:0016020|GO:0016021 | |
Cmo02g00591 | 398 | Pfam | EamA-like transporter family | 39 | 163 | IPR000620 | GO:0016020|GO:0016021 | |
Cmo02g00591 | 398 | PANTHER | WAT1-RELATED PROTEIN | 39 | 371 | - | - | |
Cmo02g00591 | 398 | MobiDBLite | consensus disorder prediction | 367 | 387 | - | - | |
Cmo02g00591 | 398 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 275 | 360 | - | - | |
Cmo02g00591 | 398 | MobiDBLite | consensus disorder prediction | 367 | 398 | - | - | |
Cmo02g00591 | 398 | PANTHER | WAT1-RELATED PROTEIN | 39 | 371 | IPR030184 | GO:0016021|GO:0022857 | |
Cmo02g00591 | 398 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 72 | 182 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo02g00591 | Cmo07g00804 | CCT | |
Cmo02g00591 | Cmo03g01066 | CCT | |
Cmo02g00591 | Cmo20g01088 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00591 | Cmo-Chr2:3540127 | Cmo20g01088 | Cmo-Chr20:10336094 | 5.66E-159 | dispersed | |
Cmo20g01087 | Cmo-Chr20:10313842 | Cmo02g00591 | Cmo-Chr2:3540127 | 1.42E-38 | dispersed | |
Cmo02g00591 | Cmo-Chr2:3540127 | Cmo20g01086 | Cmo-Chr20:10308282 | 7.70E-85 | wgd | |
Cmo02g00591 | Cmo-Chr2:3540127 | Cmo03g01066 | Cmo-Chr3:7944503 | 1.81E-106 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g00591 | - | - | cmos:111451464 | 738.413 |