Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00591 ATGGATGGATACACACCAATGATTCCAGGTGTATCTATAAATACCAGTTTGTTCATCAACACAAACAACCCAACCCACTTCACACACCCTCACCACATGGAACACAACAAGCCTTTGGCGGCGGCGATTCTCATTCAAACCATCTACGCCGCCATGTTTCTTCTCTCCAAGGCCGCTTTTGACGGCGGAATGAACAATTTCATCTTCACTTTCTACCGCCAAGCCTTCGCCACCATCTCTCTTTCTCCCATTACCTTCTTTTTCAAATGGAAAACTGCCCCACCCTTGACATTCTTCACCTTCTGCAAAATATTTTTGCTTTCGTTTGTCGGGATTGCTGTATCTTTAAATCTTTATGGGATTGCTCTTGTGTATACATCGGCAACGTTAGCGGCAGCCACGACGAATTGTCTCCCGGTTATAACGTTCTTCGTCGCGCTTTTACTTAGGCTTGAGGTGTTGAGATTAAAGTCAATAGCTGGAATAGCAAAGCTTGCAGGCATAGTTTTATGCGTCGGCGGTGTGGGGGTGTTGGCATTCTACAAAGGCCCACAACTCAAATGGTTCAATAATCATCACCTCTTTTCTGCCCACAACGCCGCCACCCACGCCCACTCTGCCACTGCCTCTTCCACCAGCTCATGGCTCAAGGGCTGCTTTTTGATGCTCTCTTCCAATACCCTTTGGGGCATTTGGATTGTTCTTCAGACATTTGTGCTGAAAAGCTATCCATCCAAGCTTGTGTTGACAAATCTTCAGTGTTTGTTGAGTTCATTTCAAACATTTGCTATTGCTATTGCAATGGAGAGAGACCCTAAAGAATGGAAATTGGGGTGGGATGTTAGGCTTCTTTCAGTGGCATATTGTGGTGTTGTGGTGACTGCTGTTACGTATTGCCTTCAAGCGTGGATTATTGAGAAGAAAGGCCCCGTTTTTCTTGCTATGTCTACGCCGTTTTCTCTAGTTATTACCACCGTCTGTTCCGCTATTCTTCTTGGCGACAATATCACTCTTGGAAGTGGTTTGGGCGGTATTTTATTGGTGGGAGGACTATATTTTGTGCTGTGGGGGAAGAGCAAAGAGCAAAAGATAAGTGAAGGGTTGAAAGAAGGTGGCAAAGAATGCAGCATGCAACAACACAAGGAGAATACAAAATTAGGAGATGAAAATTCAGCATCTCCCATTGAAAATGTCTAA 1197 44.78 MDGYTPMIPGVSINTSLFINTNNPTHFTHPHHMEHNKPLAAAILIQTIYAAMFLLSKAAFDGGMNNFIFTFYRQAFATISLSPITFFFKWKTAPPLTFFTFCKIFLLSFVGIAVSLNLYGIALVYTSATLAAATTNCLPVITFFVALLLRLEVLRLKSIAGIAKLAGIVLCVGGVGVLAFYKGPQLKWFNNHHLFSAHNAATHAHSATASSTSSWLKGCFLMLSSNTLWGIWIVLQTFVLKSYPSKLVLTNLQCLLSSFQTFAIAIAMERDPKEWKLGWDVRLLSVAYCGVVVTAVTYCLQAWIIEKKGPVFLAMSTPFSLVITTVCSAILLGDNITLGSGLGGILLVGGLYFVLWGKSKEQKISEGLKEGGKECSMQQHKENTKLGDENSASPIENV 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3540127 3542339 - CmoCh02G005910.1 Cmo02g00591 376188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00591 398 Pfam EamA-like transporter family 217 355 IPR000620 GO:0016020|GO:0016021
Cmo02g00591 398 Pfam EamA-like transporter family 39 163 IPR000620 GO:0016020|GO:0016021
Cmo02g00591 398 PANTHER WAT1-RELATED PROTEIN 39 371 - -
Cmo02g00591 398 MobiDBLite consensus disorder prediction 367 387 - -
Cmo02g00591 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 275 360 - -
Cmo02g00591 398 MobiDBLite consensus disorder prediction 367 398 - -
Cmo02g00591 398 PANTHER WAT1-RELATED PROTEIN 39 371 IPR030184 GO:0016021|GO:0022857
Cmo02g00591 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 72 182 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00591 Cmo07g00804 CCT
Cmo02g00591 Cmo03g01066 CCT
Cmo02g00591 Cmo20g01088 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00591 Cmo-Chr2:3540127 Cmo20g01088 Cmo-Chr20:10336094 5.66E-159 dispersed
Cmo20g01087 Cmo-Chr20:10313842 Cmo02g00591 Cmo-Chr2:3540127 1.42E-38 dispersed
Cmo02g00591 Cmo-Chr2:3540127 Cmo20g01086 Cmo-Chr20:10308282 7.70E-85 wgd
Cmo02g00591 Cmo-Chr2:3540127 Cmo03g01066 Cmo-Chr3:7944503 1.81E-106 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00591 - - cmos:111451464 738.413