Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00608 ATGGGTTCTTCAAGTGCTATCTCCCTCCTCGGAGTCTTGACTCTCCTCTACCTATTCTCCTTCTCATCCTCCGCCATCCATAGCCCAGTTCCGGCGGCGGATATCTGCCATTCCACAACCTCTCCATCCTTCTGCAAAGCCTTCCTCCCCAACTCCCTTGCCACCGTCCACTCCCATTGCCGCTTCACTCTCCGCCATGCCCTCGCCCATGCACGCTCCTTCCTTGCCCTCGTTGACAGCCACCTCGCCCTCTTCCCCTCCCTCGCTGCCCTCCACGACTGCCGCTCCCTCGCTGCGGCTAACCTCGACTTCCTATCCAACACCTTCCCCACAGTCAACACCACCACCACCACAAACGCCCTTCCCTTCTACAAAGCCGATGAGATGGTGTCGTTGCTTAGCGCAGTCATCACCAATGAAAACACTTGTTACGAAGGGCTGCTGAGCTCGGGCTCGGGCTCGGGCTCGGGCTCGGGCTCGGTTGATAAGGTGTTGAAGGCCATCTCCTTCGATACAAAGCTTTATAGTTTGTACCTTTCTTTGTTCAAAATGGGTTGGGTTTCTAATGATGTCAAGGCTCCTCATGTCCCAAAGATGAAGCATTTTGGGCGTGGAAAGGGGCAGTTGAAGCTCAACATGTCCCCCAAAAACCGTGCCTATTATGAGCGCTTGATGCATAGGAGAAAGCCACCGGCTAGGAGGCTTCTTCAAACCAATTCTAATGAAGATGATGGAATTTTGGTCAATGGTATTGTTGCGGTGGATCCGAATGGAACATATGACTTCACCACCATCAACGCCGCCATTCAGGCAGCTCCCAACAACTCCGTCGCCGCCGATGGATATTTCTTGATCTTCGTCACTGCCGGAGTTTACAACGAGAGCGTGATGGTTCCCAAACACAAAAAGTATGTGTTGATGATTGGAGAAGGCAACAACCAAACCATCATCACCGGGAGAAAAAACGTCCCCGATGGCTCTACCACTTTCAATAGCGGAACCGTCATTGTGGAGGGAACTGGGTTTTTCGGGGTGAACCTGACGATCACCAACACAGCCGGACCCAACAAATTCCAAGCCGTGGCATTGCGAGTGAGTGCCGACATGACGACGTTCTACAGTTGCATATTCGAAGGGTATCAAGACACTCTCTACCCCCACTCTCTTCGACAATTCTATAGAGAGTGCGACATCTACGGAACTATAGACTTTATTTTGGGGGACGCGGCTGTGGTGTTCCAAAACTGCAACATTTACGCCCGCCTCCCAATGAAAGGCCAATACATTGTCATAACGGCGCAAGGCCGAACTGACCCAAATCAAAACACCGGAATCTCCATCCACAACTGCACCATCAAGCCCACTGCGCAGCTCGCAGCCAGCCCCACCATCAAGAGCTACTTCGGGAGGCCGTGGAAGGAGTACGCTCGAACAGTTTACATGCAGTCGTTTATCGATGCATTTATCGACCCAGCAGGGTGGAATGTGTGGGACGGGACTTTGAATTTGAACACGTCGTATTACGCTGAGTTTAATAACTCGGGGCTGGGATCTGACACTTCGCGGCGGGCTAAATGGGCGGTCGGTTTGATCAACGCCACCGTGGCTAATAACTTCACGGTGTCTCCGTTCTTGGGTGGAGATCAATGGCTACCGCCGACCACCGTGCCGTACACTGGTGGTTTGATATCATAA 1695 52.51 MGSSSAISLLGVLTLLYLFSFSSSAIHSPVPAADICHSTTSPSFCKAFLPNSLATVHSHCRFTLRHALAHARSFLALVDSHLALFPSLAALHDCRSLAAANLDFLSNTFPTVNTTTTTNALPFYKADEMVSLLSAVITNENTCYEGLLSSGSGSGSGSGSVDKVLKAISFDTKLYSLYLSLFKMGWVSNDVKAPHVPKMKHFGRGKGQLKLNMSPKNRAYYERLMHRRKPPARRLLQTNSNEDDGILVNGIVAVDPNGTYDFTTINAAIQAAPNNSVAADGYFLIFVTAGVYNESVMVPKHKKYVLMIGEGNNQTIITGRKNVPDGSTTFNSGTVIVEGTGFFGVNLTITNTAGPNKFQAVALRVSADMTTFYSCIFEGYQDTLYPHSLRQFYRECDIYGTIDFILGDAAVVFQNCNIYARLPMKGQYIVITAQGRTDPNQNTGISIHNCTIKPTAQLAASPTIKSYFGRPWKEYARTVYMQSFIDAFIDPAGWNVWDGTLNLNTSYYAEFNNSGLGSDTSRRAKWAVGLINATVANNFTVSPFLGGDQWLPPTTVPYTGGLIS 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3762699 3764686 - CmoCh02G006080.1 Cmo02g00608 376205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00608 564 Pfam Plant invertase/pectin methylesterase inhibitor 34 154 IPR006501 GO:0004857
Cmo02g00608 564 Pfam Pectinesterase 253 548 IPR000070 GO:0030599|GO:0042545
Cmo02g00608 564 SMART PMEI_2 26 181 IPR006501 GO:0004857
Cmo02g00608 564 Gene3D - 248 562 IPR012334 -
Cmo02g00608 564 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 184 IPR035513 -
Cmo02g00608 564 PANTHER PECTINESTERASE 15 562 - -
Cmo02g00608 564 CDD PMEI-like_3 35 186 - -
Cmo02g00608 564 SUPERFAMILY Pectin lyase-like 248 561 IPR011050 -
Cmo02g00608 564 PANTHER PECTINESTERASE 15 562 - -
Cmo02g00608 564 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 184 IPR035513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00608 Cmo-Chr2:3762699 Cmo08g00431 Cmo-Chr8:2675526 0 dispersed
Cmo02g00608 Cmo-Chr2:3762699 Cmo20g01147 Cmo-Chr20:11262277 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00608 K01051 - csv:101216984 816.994