Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00645 ATGGCGGCGGGTGAAGGATGTCCATTGAAGCTCTACTCCTACTACCTCAGCACTTGTGCTCAACGTGTTCGAATAGCTCTTAACTTAAAAGGGCTAAGGTTTGAGTACAAAGCTGTTGATCTTATGAAGGGAGAGCATTTGGGTCCTGACTTTTTAAAGCTCAATCCCGTTGGCTTTGTACCTGCTCTCGTGGATGGCGATATCGTCATTGCCGACTCTTTTGCTATAATAATGTATTTAGAGGAGAAGTATCCTCAACATCCTCTCTTGCCGAGTGATCTTTATAAAAGAGCTATCAATTACCAGGCTGCAAATATTGTTTCTTCAAGCATACAACCTCTTCAAAACCTAATTGTTGAGAATTACATTGAGGAAAAATGTGGTGTAGAGGACAAACTCTCTTGGGTTCATATGATCATTGGAAAAGCACTTGAGAAGTTACTAAAGGATCATGCTGGAAAATTTGCCACTGGAGATGAAATTTACCTGGCGGACTTGTTTTTGGCACCTCAACTCTACCGTGCCATTGAGACATTCAATGTTGACATGTCCAAGTTTCCACTTCTGTCAAGATTGTATGAGGAATACAAGGAGGTACCAGCATTTGAAGATGCAGCACCAGAGAAGCAGCCTGATGCTCCTTCTCAAACCTCTGCCTGA 660 42.42 MAAGEGCPLKLYSYYLSTCAQRVRIALNLKGLRFEYKAVDLMKGEHLGPDFLKLNPVGFVPALVDGDIVIADSFAIIMYLEEKYPQHPLLPSDLYKRAINYQAANIVSSSIQPLQNLIVENYIEEKCGVEDKLSWVHMIIGKALEKLLKDHAGKFATGDEIYLADLFLAPQLYRAIETFNVDMSKFPLLSRLYEEYKEVPAFEDAAPEKQPDAPSQTSA 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4025129 4030463 + CmoCh02G006450.1 Cmo02g00645 376242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00645 219 CDD GST_C_Zeta 94 210 IPR034330 -
Cmo02g00645 219 Gene3D - 92 216 - -
Cmo02g00645 219 TIGRFAM maiA: maleylacetoacetate isomerase 10 213 IPR005955 GO:0003824|GO:0005737|GO:0009072
Cmo02g00645 219 PANTHER MALEYLACETOACETATE ISOMERASE 9 215 - -
Cmo02g00645 219 SUPERFAMILY Thioredoxin-like 8 91 IPR036249 -
Cmo02g00645 219 Pfam Glutathione S-transferase, N-terminal domain 11 87 IPR004045 -
Cmo02g00645 219 CDD GST_N_Zeta 9 81 IPR034333 -
Cmo02g00645 219 SFLD Main (cytGST) 9 197 - -
Cmo02g00645 219 PANTHER S-CRYSTALLIN-RELATED 9 215 - -
Cmo02g00645 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 215 IPR010987 -
Cmo02g00645 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 88 IPR004045 -
Cmo02g00645 219 Gene3D Glutaredoxin 8 91 - -
Cmo02g00645 219 SFLD Glutathione Transferase (cytosolic) 9 197 IPR040079 -
Cmo02g00645 219 SUPERFAMILY GST C-terminal domain-like 88 214 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00645 Cmo-Chr2:4025129 Cmo06g01161 Cmo-Chr6:8901168 3.21E-82 dispersed
Cmo14g02038 Cmo-Chr14:14905019 Cmo02g00645 Cmo-Chr2:4025129 3.43E-11 dispersed
Cmo02g00645 Cmo-Chr2:4025129 Cmo02g00647 Cmo-Chr2:4034616 5.48E-115 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00645 K01800 - csv:116401624 359.377