Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g00645 | ATGGCGGCGGGTGAAGGATGTCCATTGAAGCTCTACTCCTACTACCTCAGCACTTGTGCTCAACGTGTTCGAATAGCTCTTAACTTAAAAGGGCTAAGGTTTGAGTACAAAGCTGTTGATCTTATGAAGGGAGAGCATTTGGGTCCTGACTTTTTAAAGCTCAATCCCGTTGGCTTTGTACCTGCTCTCGTGGATGGCGATATCGTCATTGCCGACTCTTTTGCTATAATAATGTATTTAGAGGAGAAGTATCCTCAACATCCTCTCTTGCCGAGTGATCTTTATAAAAGAGCTATCAATTACCAGGCTGCAAATATTGTTTCTTCAAGCATACAACCTCTTCAAAACCTAATTGTTGAGAATTACATTGAGGAAAAATGTGGTGTAGAGGACAAACTCTCTTGGGTTCATATGATCATTGGAAAAGCACTTGAGAAGTTACTAAAGGATCATGCTGGAAAATTTGCCACTGGAGATGAAATTTACCTGGCGGACTTGTTTTTGGCACCTCAACTCTACCGTGCCATTGAGACATTCAATGTTGACATGTCCAAGTTTCCACTTCTGTCAAGATTGTATGAGGAATACAAGGAGGTACCAGCATTTGAAGATGCAGCACCAGAGAAGCAGCCTGATGCTCCTTCTCAAACCTCTGCCTGA | 660 | 42.42 | MAAGEGCPLKLYSYYLSTCAQRVRIALNLKGLRFEYKAVDLMKGEHLGPDFLKLNPVGFVPALVDGDIVIADSFAIIMYLEEKYPQHPLLPSDLYKRAINYQAANIVSSSIQPLQNLIVENYIEEKCGVEDKLSWVHMIIGKALEKLLKDHAGKFATGDEIYLADLFLAPQLYRAIETFNVDMSKFPLLSRLYEEYKEVPAFEDAAPEKQPDAPSQTSA | 219 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4025129 | 4030463 | + | CmoCh02G006450.1 | Cmo02g00645 | 376242 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g00645 | 219 | CDD | GST_C_Zeta | 94 | 210 | IPR034330 | - | |
Cmo02g00645 | 219 | Gene3D | - | 92 | 216 | - | - | |
Cmo02g00645 | 219 | TIGRFAM | maiA: maleylacetoacetate isomerase | 10 | 213 | IPR005955 | GO:0003824|GO:0005737|GO:0009072 | |
Cmo02g00645 | 219 | PANTHER | MALEYLACETOACETATE ISOMERASE | 9 | 215 | - | - | |
Cmo02g00645 | 219 | SUPERFAMILY | Thioredoxin-like | 8 | 91 | IPR036249 | - | |
Cmo02g00645 | 219 | Pfam | Glutathione S-transferase, N-terminal domain | 11 | 87 | IPR004045 | - | |
Cmo02g00645 | 219 | CDD | GST_N_Zeta | 9 | 81 | IPR034333 | - | |
Cmo02g00645 | 219 | SFLD | Main (cytGST) | 9 | 197 | - | - | |
Cmo02g00645 | 219 | PANTHER | S-CRYSTALLIN-RELATED | 9 | 215 | - | - | |
Cmo02g00645 | 219 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 93 | 215 | IPR010987 | - | |
Cmo02g00645 | 219 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 7 | 88 | IPR004045 | - | |
Cmo02g00645 | 219 | Gene3D | Glutaredoxin | 8 | 91 | - | - | |
Cmo02g00645 | 219 | SFLD | Glutathione Transferase (cytosolic) | 9 | 197 | IPR040079 | - | |
Cmo02g00645 | 219 | SUPERFAMILY | GST C-terminal domain-like | 88 | 214 | IPR036282 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00645 | Cmo-Chr2:4025129 | Cmo06g01161 | Cmo-Chr6:8901168 | 3.21E-82 | dispersed | |
Cmo14g02038 | Cmo-Chr14:14905019 | Cmo02g00645 | Cmo-Chr2:4025129 | 3.43E-11 | dispersed | |
Cmo02g00645 | Cmo-Chr2:4025129 | Cmo02g00647 | Cmo-Chr2:4034616 | 5.48E-115 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g00645 | K01800 | - | csv:116401624 | 359.377 |